Gene Rpic12D_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3136 
Symbol 
ID8020820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3304278 
End bp3305180 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID644831932 
ProductUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 
Protein accessionYP_002983075 
Protein GI241664715 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATC CTGACTGGAC CCTGCTGGCG CACGACCAGC ACTATCCCGC CGGCGCATTA 
TATGTGGTGG CCACCCCCAT CGGGAACGCG GCCGACGTGT CGCTACGGGC GCGCTACGTG
CTGGGCCTTG TCGACGCGGT GGCCTGCGAA GACACGCGCA ACACCGGGCA ACTGCTCCAT
CGGCTGGGGC TGTCGCGGCC GATGCTCGCG GCGCGCGAAC ACAACGAGCG CGAGGCCGCC
GCGCGCATCG TGGCGCGGCT GGCGCAGGGC GAGCGCATTG CGTATGTATC CGATGCGGGC
ACGCCGGGCG TGTCGGACCC GGGCTCGCGG ATTGTCGAGG CGGTACGTGC GGCGGGGCAG
CGCGTGATTC CGCTGCCGGG CGCGAGCGCG GTGGTGACGG CGCTTTCTGC CGCCGGGGAG
TTGCTCGACA CGTCTGGTGG GCAGTTCACC TTCGTCGGCT TCCTGCCGCC CAAGGCCGGG
CAACGCGAGG CGGCCATCCG CCAATGGGCG GCGCACGGGC CGGCATGGGT CCTGTACGAG
GCGCCGCATC GCATCGAGGC CACACTCGCC GCGTTGGCGG AACACCTGCC CGCGCGACGC
ATCCTGATCG GCCGGGAATT GACCAAGCTG TTCGAGCAGA TCGTCGTGCT GCCTGCCGCC
GAAGCACCGG CCTGGCTTGC CGCCGATGTC TCACATGGCA AGGGCGAATT CGTTCTGGTG
GTGGAGGGCG CAGGTGCGCA GGACGCTGCG CCGACGGCGA TGGCGGCAGA CCAGGTCTTG
CGTCTGCTGT TGGCCGAGTT GCCTGCCAAG CGCGCAGCCA AGCTGGCCGG CGCAATTACG
GGAGCGTCGG TCGACGCGCT GTATCAAAGC GCGCTGGCGC TGAAAAACGA AGGGAAGGAC
TGA
 
Protein sequence
MSDPDWTLLA HDQHYPAGAL YVVATPIGNA ADVSLRARYV LGLVDAVACE DTRNTGQLLH 
RLGLSRPMLA AREHNEREAA ARIVARLAQG ERIAYVSDAG TPGVSDPGSR IVEAVRAAGQ
RVIPLPGASA VVTALSAAGE LLDTSGGQFT FVGFLPPKAG QREAAIRQWA AHGPAWVLYE
APHRIEATLA ALAEHLPARR ILIGRELTKL FEQIVVLPAA EAPAWLAADV SHGKGEFVLV
VEGAGAQDAA PTAMAADQVL RLLLAELPAK RAAKLAGAIT GASVDALYQS ALALKNEGKD