Gene Rpic12D_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3132 
Symbol 
ID8020816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3301216 
End bp3302508 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content69% 
IMG OID644831928 
ProductFlavocytochrome c sulphide dehydrogenase flavin-binding 
Protein accessionYP_002983071 
Protein GI241664711 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG GGCTGCGCAA GGATCGACGC GCAGTCTTGC GCGCGCTCGG GGCAACCGCG 
CTGGCCGGGC CGCTGGCCGC CTGCGCATCA CTGTCGGGCG TGCGCAATGC ACGCGTGGTG
GTGGTTGGCG GCGGGTATGG CGGTGCAACG GCGGCCAAGT ACGTGCGCGT GTTTTCCGGT
GGCCATGTCG ATGTCACGCT GGTTGAGCCG AACGCCGCGT TCGTCTCGTG CCCGCTGTCG
AACCTCGTGC TGTCGGGCGA CCGTGACATC GCGTCGATCA CCGTGCCGTA TGACGCGCTG
GTCGAGCGCC ACGGCGTGCG GTGGGTGCGC GACCGCGCAT CGGCCATCGA CCCTGGCGCC
AAGCAGGTGC GGCTGGCAGG CGGCGGCACG CTTGATTACG ACCGGCTGAT CCTCTCGCCC
GGCATCGACT TCGTGCCGGG GGCGATTCCC GGTCTCGCCA ATGCGGCCAC CGCCGCGCAA
GCGCCCCACG CCTGGAAAGC CGGCACGCAG ACGCTGGCGC TGCGCCATCG GCTCGAAGCC
ATGCCCAACG GCGGCACGGT GGCGATCAGC ATTCCGCTGG CGCCGTACCG CTGCCCGCCC
GCGCCGTACG AGCGCGCGTG CCTGATCGCC CACTGGCTGC AGCGCGCCAA GCCCGATTCG
CGCGTGCTCA TTCTCGATGC CAACGATGAC GTCACCTCCA AAGGCGCGTT GTTCAAGCGC
GTGTGGGCAG AGCGCTATCC GCAGCACATC GAATATCGCC CGCAATACAA CGCCGTCGAC
ATCGATGCCA CGGGCCGCGT GCTCAAGTTC GATGTGCAGG ACGACGTGCA GGTCGATGTC
GTCAACCTCA TCCCCCCGCA GCGTGCCGGG GCGATTGCCG TGCAAGCCGG GCTGGCGACG
GCCAACGGGC GCTGGTGCGA AGTGGACTTC CTCTCGTTCG AATCGAAGGT GGCCCCGGGC
GTGCATGTGA TTGGCGATGC CATCCAGACC GCGCCGCTGA TGCCCAAGTC GGGCCACATG
GCCAATCAGC ACGGCAAGGT TGCCGCCGCC GCCGTGGTGG CGATGCTGGC GGGCCAAGCG
CCCGATGCGT CGCCGCTGTA TACCAACACC TGCTACAGCT TTGCCACGCC CGACGAGGCG
ATGCACGTGG CAACCGTGCA CCGCTACGAC CCGGCCGAGC ACACCATGGT GACGGTGCCC
GGCGCCGGCG GGCTTTCCGA AGCGCCTTCC GCAGCGGAGG GCAAGCTGGC GCAAGGCTGG
AGCCGCGCCA TCTGGTCGGA CATGCTGGGC TAA
 
Protein sequence
MSEGLRKDRR AVLRALGATA LAGPLAACAS LSGVRNARVV VVGGGYGGAT AAKYVRVFSG 
GHVDVTLVEP NAAFVSCPLS NLVLSGDRDI ASITVPYDAL VERHGVRWVR DRASAIDPGA
KQVRLAGGGT LDYDRLILSP GIDFVPGAIP GLANAATAAQ APHAWKAGTQ TLALRHRLEA
MPNGGTVAIS IPLAPYRCPP APYERACLIA HWLQRAKPDS RVLILDANDD VTSKGALFKR
VWAERYPQHI EYRPQYNAVD IDATGRVLKF DVQDDVQVDV VNLIPPQRAG AIAVQAGLAT
ANGRWCEVDF LSFESKVAPG VHVIGDAIQT APLMPKSGHM ANQHGKVAAA AVVAMLAGQA
PDASPLYTNT CYSFATPDEA MHVATVHRYD PAEHTMVTVP GAGGLSEAPS AAEGKLAQGW
SRAIWSDMLG