Gene Rpic12D_3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3131 
Symbol 
ID8020815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3300206 
End bp3301093 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID644831927 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002983070 
Protein GI241664710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCCA AGGATCTGCT GCTGGCCCTG ACCGTTGTGC TGGTGTGGGG CGTCAACTTC 
GTCGTCATCA AGGTGGGCCT GCACGGCGTG CCGCCCATGC TGCTAGGTGC GCTGCGCTTT
GCGCTGGTCG CCTTCCCGGC TGTGCTGTTC GTGCCGCGCC CGAAGATTGC GCTCAAGTGG
CTGGTGGCTT ACGGCGCCAC CATCAGCTTC GGGCAGTTCG CGTTCCTGTT CTCCGCCATG
TATGTGGGCA TGCCGGCGGG GCTGGCCTCG CTGGTGCTGC AGTCGCAGGC GTTCTTTACG
CTGACGATTG CCGCCATCGT GCTGCGCGAG CCGATCCGCT GGTTCCACCT GGCCGGCATG
GCGGTGGCCG CGGGCGGGCT GGCCGTCATT GGCATGGCGG GCGGCGGCTC GGTCACGGGC
ATGACCACCG CCGGCTTCCT GCTGACGCTG TGCGCGGCGT TTTCTTGGGC CAGCGGCAAT
ATCGTCACCA AGCGCGTCGG GCCGGTGAAT GTGGTGAGCC TGGTGGTGTG GGGCGCCGTC
ATTCCGCCGA TTCCGTTCTT CCTGCTGTCG TACTGGCTGG AGGGGCCGCA GCAGATCGCA
CACAGCCTGG CGAACATCAG CTGGTCCAGC ATCGGTGCGA TCGTCTACCT GTCTTTTGGT
GCCACCATCT TCGGTTACAG CCTGTGGAGC CGCCTGCTGG CGCGCTACGC CGCCAGCCAG
GTCGCGCCGC TCACGCTGCT GGTGCCGGTG GTGGGGCTGG TATCGGCCGC CGTGCTGCTG
GGCGAGCGCC TGGTGGCCGC CCAATGGCTG GGCGGCGCGG TGGTGATGGT CGGGCTGCTG
CTCAACGTGT TTGGTGGCCG GCTGGCCGCG CGGCGGGCGA TGGCCTGA
 
Protein sequence
MSPKDLLLAL TVVLVWGVNF VVIKVGLHGV PPMLLGALRF ALVAFPAVLF VPRPKIALKW 
LVAYGATISF GQFAFLFSAM YVGMPAGLAS LVLQSQAFFT LTIAAIVLRE PIRWFHLAGM
AVAAGGLAVI GMAGGGSVTG MTTAGFLLTL CAAFSWASGN IVTKRVGPVN VVSLVVWGAV
IPPIPFFLLS YWLEGPQQIA HSLANISWSS IGAIVYLSFG ATIFGYSLWS RLLARYAASQ
VAPLTLLVPV VGLVSAAVLL GERLVAAQWL GGAVVMVGLL LNVFGGRLAA RRAMA