Gene Rpic12D_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3124 
Symbol 
ID8020808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3296346 
End bp3296858 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID644831920 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002983063 
Protein GI241664703 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACGC TTCGACGGTT CCTGATGTGG ACGGCAGCGG CGATCGTGTT TGCCGCCACG 
CAGTTTGCCA ATCATGCGCA GGCCGTCGAA GTGGGCGATG TGGTGGCGCT GCCCGACGTG
CAGTTGCTCG ACGGCACGCG CGTGCCGGGC GATGCGTGGC ACGGGCACCC GGTCATCATC
GCCACGTGGG CATCGTGGTG CCCGTTCTGC GCGCTGCAGA ACCCGCGTCT GCAAAAGCTG
TACGACGCCA CGCGCGGCAC GGACCTGCGC ATCCTCACCA TCAGCATCGA CGCCAACCCG
CAGCTTGCGA AGGACTACGT CGCCAAGCGC CGCTTCACCT TTCCGGTGAC GATGGAAACC
GACGCGCTGT GCGCCGCCAC CGGCCCGCGC AAGGGCCTGC CCGAACTGCT CGTGCTCGAC
GCCAAGGGCC GCGTGGTGCG CAAGGAAGTC GGCGAGATGC TGGAAGACGA CGTGGCCGAC
TTGGCACGCT ACGCACACAG CCCCAAGCAA TGA
 
Protein sequence
MHTLRRFLMW TAAAIVFAAT QFANHAQAVE VGDVVALPDV QLLDGTRVPG DAWHGHPVII 
ATWASWCPFC ALQNPRLQKL YDATRGTDLR ILTISIDANP QLAKDYVAKR RFTFPVTMET
DALCAATGPR KGLPELLVLD AKGRVVRKEV GEMLEDDVAD LARYAHSPKQ