Gene Rpic12D_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3123 
Symbol 
ID8020807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3294628 
End bp3296349 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content68% 
IMG OID644831919 
Product5'-Nucleotidase domain protein 
Protein accessionYP_002983062 
Protein GI241664702 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC GCGAATTCGT TCAAGCCCTG GCGATTGCCG CTGCCGCCGG CCTGCGCCTA 
GGCGACGCGC ACGCCGATAC GTTCAGCTAT GACGTGCCGC GCTTCGGCAA CGTCCACCTG
CTGCACTTCA CCGACTGCCA CGCGCAGTTG CTGCCCATTG AATACCGCGA GCCCAGCGTC
AACCTGGGCG TGGCGCAATG GGCCGGGCAG CCGCCGCATC TGGTGGGGCA TGCGCTGCTC
AAGCGGTACG GTATTGCGCC CGGCTCGCGC GCCGCGCACG CGCTTACGTC GCTCGACTTT
ACCGAGGCCG CGCGCCGCTA CGGCCGCATG GGCGGCTTCG CACACCTGGC CACGCTCATC
AAGCGCCTGC GCGCCACGCG CCCGAATGCG CTGCTGCTGG ACGGCGGCGA CACCTGGCAG
GGCTCCGCCA CCGCGTTGTG GACGAACGGC CAGGACATGG TGGACGCGGC CCTCGCGCTG
GGCGTGGACG TCATGACCCC GCACTGGGAG ATGACCTACG GCGCCGACCG CGTGCGCCAC
GTGGTCGATC ACGACTTCAA GAACAAGGTC GCCTTTGTCG CGCAGAACAT CCAGACCGCC
GACTTTGGTG ATCCGGTGTT TGACCCGTAC GTGCTGCGCG AGCTGAACGG CGTGCGGGTC
GCCATCATCG GGCAGGCGTT TCCGTACACG CCGATCGCGC ACCCCGCCGA TTTCACGCCC
GACTGGACCT TCGGCATTCA GGAAGAACGG CTGCAGAAGA TGATTGACGA GGCGCGGGGC
AAGGGCGCCA AGGTGGTCGT GCTGCTGTCG CACAACGGCA TGGATGTCGA CCTGAAGCTC
GCCTCGCGCG TGCGCGGGTT GGACGCCATT CTGGGCGGGC ATACGCACGA TGCCGTGCCC
ACGCCCGTCA AGGTCAGCAA CCCGGGCGGC GTGACGCTCG TGACCAACGC GGGCGCCAAC
GGCAAGTTTG TCGGCGTGCT CGATCTGGAT GTGCGCGGCG GCACCGTGCG CGACATCCGC
TACACGTTGC TGCCCGTGTT TGCCGACCTC CTGCCGGCCG ACCCCGCCAT GACGGCGCTG
ATTGACCGCG TGCGTGCGCC GTACCAAGAC AAGCTGGGTG AAACGCTGGC CACCAACCGC
GGCCTGCTGT ACCGGCGCGG CAACTTCAAC GGCACGTTCG ACCAGCTCAT CGTCGATGGG
CTGATGCACG CGCAGGGCGC CGAGATTGCC TTCTCGCCCG GCTTCCGCTG GGGCACCACG
CTGCTGCCCG GCGAGACCCT GACCATGGAA GCGCTGATGG CCCAGACGGC CATCACGTAC
CCGGCCACCA CGCTAACCGA AATGACCGGC ACCACCATCA AGACCGTGCT GGAAGACGTG
GCCGACAACC TGTTCAACCC AGACCCGTAT TACCAACAGG GCGGCGACAT GGTGCGCACC
GGCGGCCTGC GCTACACCAT CGACCCGATG AAGCCGATGG GCCAGCGCAT TACCGACATG
CGCCTGGGCC CGGGTGACGG CAAGCCCATC GACGCCGACC GCCGCTACAA AGTGGCCGGC
TGGGCCGCCG TGTCGCCCGA AGCCCGCAAG GCGGGCGGCC GCCCCGTGTG GGACGTGCTG
GCCGACTGGC TGCGCGACCA GCGCGAAGTG ACCGCAAGGC CGCTGAACAC GCCGCGCATT
GTCGGCATGG AAGGCAATCC GGGCATGGAA AACGCGGGCT AA
 
Protein sequence
MNRREFVQAL AIAAAAGLRL GDAHADTFSY DVPRFGNVHL LHFTDCHAQL LPIEYREPSV 
NLGVAQWAGQ PPHLVGHALL KRYGIAPGSR AAHALTSLDF TEAARRYGRM GGFAHLATLI
KRLRATRPNA LLLDGGDTWQ GSATALWTNG QDMVDAALAL GVDVMTPHWE MTYGADRVRH
VVDHDFKNKV AFVAQNIQTA DFGDPVFDPY VLRELNGVRV AIIGQAFPYT PIAHPADFTP
DWTFGIQEER LQKMIDEARG KGAKVVVLLS HNGMDVDLKL ASRVRGLDAI LGGHTHDAVP
TPVKVSNPGG VTLVTNAGAN GKFVGVLDLD VRGGTVRDIR YTLLPVFADL LPADPAMTAL
IDRVRAPYQD KLGETLATNR GLLYRRGNFN GTFDQLIVDG LMHAQGAEIA FSPGFRWGTT
LLPGETLTME ALMAQTAITY PATTLTEMTG TTIKTVLEDV ADNLFNPDPY YQQGGDMVRT
GGLRYTIDPM KPMGQRITDM RLGPGDGKPI DADRRYKVAG WAAVSPEARK AGGRPVWDVL
ADWLRDQREV TARPLNTPRI VGMEGNPGME NAG