Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3123 |
Symbol | |
ID | 8020807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3294628 |
End bp | 3296349 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644831919 |
Product | 5'-Nucleotidase domain protein |
Protein accession | YP_002983062 |
Protein GI | 241664702 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCC GCGAATTCGT TCAAGCCCTG GCGATTGCCG CTGCCGCCGG CCTGCGCCTA GGCGACGCGC ACGCCGATAC GTTCAGCTAT GACGTGCCGC GCTTCGGCAA CGTCCACCTG CTGCACTTCA CCGACTGCCA CGCGCAGTTG CTGCCCATTG AATACCGCGA GCCCAGCGTC AACCTGGGCG TGGCGCAATG GGCCGGGCAG CCGCCGCATC TGGTGGGGCA TGCGCTGCTC AAGCGGTACG GTATTGCGCC CGGCTCGCGC GCCGCGCACG CGCTTACGTC GCTCGACTTT ACCGAGGCCG CGCGCCGCTA CGGCCGCATG GGCGGCTTCG CACACCTGGC CACGCTCATC AAGCGCCTGC GCGCCACGCG CCCGAATGCG CTGCTGCTGG ACGGCGGCGA CACCTGGCAG GGCTCCGCCA CCGCGTTGTG GACGAACGGC CAGGACATGG TGGACGCGGC CCTCGCGCTG GGCGTGGACG TCATGACCCC GCACTGGGAG ATGACCTACG GCGCCGACCG CGTGCGCCAC GTGGTCGATC ACGACTTCAA GAACAAGGTC GCCTTTGTCG CGCAGAACAT CCAGACCGCC GACTTTGGTG ATCCGGTGTT TGACCCGTAC GTGCTGCGCG AGCTGAACGG CGTGCGGGTC GCCATCATCG GGCAGGCGTT TCCGTACACG CCGATCGCGC ACCCCGCCGA TTTCACGCCC GACTGGACCT TCGGCATTCA GGAAGAACGG CTGCAGAAGA TGATTGACGA GGCGCGGGGC AAGGGCGCCA AGGTGGTCGT GCTGCTGTCG CACAACGGCA TGGATGTCGA CCTGAAGCTC GCCTCGCGCG TGCGCGGGTT GGACGCCATT CTGGGCGGGC ATACGCACGA TGCCGTGCCC ACGCCCGTCA AGGTCAGCAA CCCGGGCGGC GTGACGCTCG TGACCAACGC GGGCGCCAAC GGCAAGTTTG TCGGCGTGCT CGATCTGGAT GTGCGCGGCG GCACCGTGCG CGACATCCGC TACACGTTGC TGCCCGTGTT TGCCGACCTC CTGCCGGCCG ACCCCGCCAT GACGGCGCTG ATTGACCGCG TGCGTGCGCC GTACCAAGAC AAGCTGGGTG AAACGCTGGC CACCAACCGC GGCCTGCTGT ACCGGCGCGG CAACTTCAAC GGCACGTTCG ACCAGCTCAT CGTCGATGGG CTGATGCACG CGCAGGGCGC CGAGATTGCC TTCTCGCCCG GCTTCCGCTG GGGCACCACG CTGCTGCCCG GCGAGACCCT GACCATGGAA GCGCTGATGG CCCAGACGGC CATCACGTAC CCGGCCACCA CGCTAACCGA AATGACCGGC ACCACCATCA AGACCGTGCT GGAAGACGTG GCCGACAACC TGTTCAACCC AGACCCGTAT TACCAACAGG GCGGCGACAT GGTGCGCACC GGCGGCCTGC GCTACACCAT CGACCCGATG AAGCCGATGG GCCAGCGCAT TACCGACATG CGCCTGGGCC CGGGTGACGG CAAGCCCATC GACGCCGACC GCCGCTACAA AGTGGCCGGC TGGGCCGCCG TGTCGCCCGA AGCCCGCAAG GCGGGCGGCC GCCCCGTGTG GGACGTGCTG GCCGACTGGC TGCGCGACCA GCGCGAAGTG ACCGCAAGGC CGCTGAACAC GCCGCGCATT GTCGGCATGG AAGGCAATCC GGGCATGGAA AACGCGGGCT AA
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Protein sequence | MNRREFVQAL AIAAAAGLRL GDAHADTFSY DVPRFGNVHL LHFTDCHAQL LPIEYREPSV NLGVAQWAGQ PPHLVGHALL KRYGIAPGSR AAHALTSLDF TEAARRYGRM GGFAHLATLI KRLRATRPNA LLLDGGDTWQ GSATALWTNG QDMVDAALAL GVDVMTPHWE MTYGADRVRH VVDHDFKNKV AFVAQNIQTA DFGDPVFDPY VLRELNGVRV AIIGQAFPYT PIAHPADFTP DWTFGIQEER LQKMIDEARG KGAKVVVLLS HNGMDVDLKL ASRVRGLDAI LGGHTHDAVP TPVKVSNPGG VTLVTNAGAN GKFVGVLDLD VRGGTVRDIR YTLLPVFADL LPADPAMTAL IDRVRAPYQD KLGETLATNR GLLYRRGNFN GTFDQLIVDG LMHAQGAEIA FSPGFRWGTT LLPGETLTME ALMAQTAITY PATTLTEMTG TTIKTVLEDV ADNLFNPDPY YQQGGDMVRT GGLRYTIDPM KPMGQRITDM RLGPGDGKPI DADRRYKVAG WAAVSPEARK AGGRPVWDVL ADWLRDQREV TARPLNTPRI VGMEGNPGME NAG
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