| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3122 |
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| Symbol | |
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| ID | 8020805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3293128 |
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| End bp | 3294342 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644831917 |
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| Product | integrase family protein |
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| Protein accession | YP_002983061 |
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| Protein GI | 241664701 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGA CCGACATAGC AATTCGTACC GCCAAGCCAA CAGATAAGCC GTACAAGCTG
GCAGATGGCG GTGGCCTATA CGTCGAGGTG TACCCCACAG GGGGCAAGTT GTGGCGTCTC
AAGTACCGGT TTGGGGGCAA GGAAAAGCGG CTGTCATTTG GCGCCTATCC GGTCGTCAGC
CTGAAGGACG CACGCGAGCG GCGTGACAAC GCCAAGCGCC TTTTGGCGGG CGGCATCGAC
CCCTCGATCG AGCGGAAGAT GCAGAAGGCC GCAACGGTCG AGCGCGCCGC CAACAGCTTC
GAGACAGTGG GCCGCGAGTG GTTTGCCAGG TATTCCCCCA CATGGGCCGA GGGCCACGCA
ACCAAGATCA TTCGTCGCCT GGAAGCCGAT ATCTTCCCGT GGCTGGGCGG CCGGCCGATT
GCGGAAATTA CAGCGCCTGA AGTGCTGACC GTCCTGCGTC GAATCGAAGC GCGCGGCGCA
TTGGATACGG CGCACCGCGC CCACCAGAAT TGCGGCCAGA TATTCCGCTA CGCCGTCGCC
ACTGGTCGCG CGATCCGCGA CCCATCCGGC GACCTGCGAG GCGCGTTGCC GCCTGCCAAG
CATGAGAATT TCGCTTCCAT CACCGACCCA GTAAAGGTGG CCGAACTGCT GCGCGCCATC
GATGCCTTCC GGGGTACGTT GGTCGTACGC TGCGCGTTGC TCCTCGCGCC TATGGTGTTC
GTGCGACCAG GCGAGCTCCG CAAAGCGGAG TGGGCAGACT TCGACCTGGA CGCCGGCGAA
TGGCGCTACC TGGTCACCAA GACCAAGACC GCGCACCTGG TGCCGCTGGC GACGCAAGCC
GTGGCGATTC TCCGCGAGCT CCATGCGCTG ACGGGGCACG GTCGTTTTGT CTTTCCTGGA
CGCGACCCCA AGAAGCCAAT GAGCGACGCC GCCGTCAATG CAGCGCTGCG GCGCATGGGC
TACGACACCC GCACGGAAAT AACGGGTCAC GGCTTTCGCG CGATGGCCCG CACGATCCTT
CACGAAGAGC TCAACTACAA GCCCGAGATC ATCGAGCACC AGCTCGCGCA CTCTGTACCG
GACGCATTGG GCACGGCCTA CAACCGCACC AAGTTCGTCA AAGAGCGGCG CGTGATGATG
CAGGCGTGGG CTGACTATCT CGACCGCTTG AAGGCAGGTG CACAACTCTT TACGTTCGGA
CCTTCAGCGG CTTAA
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| Protein sequence | MSLTDIAIRT AKPTDKPYKL ADGGGLYVEV YPTGGKLWRL KYRFGGKEKR LSFGAYPVVS
LKDARERRDN AKRLLAGGID PSIERKMQKA ATVERAANSF ETVGREWFAR YSPTWAEGHA
TKIIRRLEAD IFPWLGGRPI AEITAPEVLT VLRRIEARGA LDTAHRAHQN CGQIFRYAVA
TGRAIRDPSG DLRGALPPAK HENFASITDP VKVAELLRAI DAFRGTLVVR CALLLAPMVF
VRPGELRKAE WADFDLDAGE WRYLVTKTKT AHLVPLATQA VAILRELHAL TGHGRFVFPG
RDPKKPMSDA AVNAALRRMG YDTRTEITGH GFRAMARTIL HEELNYKPEI IEHQLAHSVP
DALGTAYNRT KFVKERRVMM QAWADYLDRL KAGAQLFTFG PSAA
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