Gene Rpic12D_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3102 
Symbol 
ID8020785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3272542 
End bp3273102 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content70% 
IMG OID644831897 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002983041 
Protein GI241664681 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCTG ATGCGGACAT GAACCCGATG CAAGGGCCCG GGCCGAGGCG CGCCTGGCTG 
CGTGCCGCAG GCGCGCTTGC CATGGGAGCC GGGCTGGGCG GCCGACAGGC GGCGGCGCAC
GCGGCCAGTC TGGAGGTTGG GCGCCCCGCA CCACCCCTCG TCCTGCACAC TCTGGACGGG
CGCAGCATTG CGACCGATGA TCTGCGCGGT CAGGTGGTAA TCCTGACGTT CTGGGCGACG
TGGTGCGGTC CTTGCCGCAC GGAGCTTCCG CTGCTATCAG CCTACGCCGC ACGCCATGCC
GACAAGGGCT TGCGCGTACT GGGCTTCAGC CTGGACGAGC CAGCGGAGCT GCCGGCCGTG
CGCGAAGTAG CGGCCAAGCT GAGCTTTCCG GTAGGCCTGC TCGGCAGCGC TTACGCGGGC
GGCTACGGCC GCATCTGGCG CCTGCCCGTC AACTTCACGG TCGACCGCAA AGGCCTGCTG
GCCGACAACG GCTGGGACTC GCGCGAGCCC GCCTGGACGG CCGAACGCCT GGAGCGCGTT
GTCACACCTT TGTTGCGTTG A
 
Protein sequence
MRSDADMNPM QGPGPRRAWL RAAGALAMGA GLGGRQAAAH AASLEVGRPA PPLVLHTLDG 
RSIATDDLRG QVVILTFWAT WCGPCRTELP LLSAYAARHA DKGLRVLGFS LDEPAELPAV
REVAAKLSFP VGLLGSAYAG GYGRIWRLPV NFTVDRKGLL ADNGWDSREP AWTAERLERV
VTPLLR