Gene Rpic12D_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3088 
Symbol 
ID8020771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3262354 
End bp3263160 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID644831884 
Producthypothetical protein 
Protein accessionYP_002983028 
Protein GI241664668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA AGACACTCGC ATGGATGCTG CCGCTCGCGT ATGCCGGCTG GTGTGCCGGA 
GCCAGCGCCG GGCCGCTCCC TGATCCTTCC GCGCCGGCCG AAGCGCACGA CAGTGCCGTG
CTGTTTCATT CCGGCACCGC AGTCGAGCTG GCCGATGACG GTGAGCTGGC CCAGCAGCGC
GGCAAATACC TCGGCGCCAG CATCGTCAGC GGATTCATGA TTGAAATGGC CTCGCAATGG
CGCAACGAAG CTGGGCAGGC AGCGGCCGAA GCGCGGATGC TCGCCACCAA CCTGCGCACC
AGTACCGCCA GCGTCGCAGT GAGCACACTG GCGTCGGTGC AGATGGGCAT AGGGGCTCTG
GCGGGCGCCG CACCCGGGGC GACAGCCTCC GGCGGGGCCG GTGTACAGGT CAACGGTGTC
GGCCAGGTGA CACAGGTGGC TGGCAATAAC AATCTGGCGA GTAACACCAC ATCGATCTCG
ATGCAGGCCG CTCCATTGCC TACACTGCCT TCGGGCAGCG CGTTGGCAAC GGCGGCGCAG
AACGGATTTA CCGCCCAGGC CCAGGTGGGC GCGGGCGGCG TGCAGGTTGC CATCACCAGC
CCGATGGGCG TCGTCTCGCA GTCGGTGACG CCCAATCTGG CCGGGGCGGC GGGGAGCGTG
ATGCAGGTGG CGCAAATGGC GGGCAATGCG CAGTTGATTG CCAATCAGTT GTCGATCCAA
CTGCAGATGC AGACGATGTC GCGTCAGCAG CTGGCTCAGA TCGGCGTGGC GCAGGCATTG
CAGGCGGTGG CGGGTTTACG CCGCTAG
 
Protein sequence
MKTKTLAWML PLAYAGWCAG ASAGPLPDPS APAEAHDSAV LFHSGTAVEL ADDGELAQQR 
GKYLGASIVS GFMIEMASQW RNEAGQAAAE ARMLATNLRT STASVAVSTL ASVQMGIGAL
AGAAPGATAS GGAGVQVNGV GQVTQVAGNN NLASNTTSIS MQAAPLPTLP SGSALATAAQ
NGFTAQAQVG AGGVQVAITS PMGVVSQSVT PNLAGAAGSV MQVAQMAGNA QLIANQLSIQ
LQMQTMSRQQ LAQIGVAQAL QAVAGLRR