| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3079 |
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| Symbol | |
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| ID | 8020762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3254410 |
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| End bp | 3255780 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644831875 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_002983019 |
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| Protein GI | 241664659 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAAC CCGCCAAGCT CAATGCCGAT TCCCTGGGTA TCGTTGAATC GGTGATCATG
GGCATCGCCG GTACTGCCCC GGCCTACAGC ATCGAGATCA CGACTTCCAC CATCATCGGG
ACGGCCGGCA CGCAGTCGCC GGCCAGCATC CTGGTGTGCG GGCTCATCAT GTTTGGCATC
GCGTACGCGT TCATCAACAT GAACCGTGCT CTGGCGAGTG CCGGCACCTC GTATTCGTGG
GTGAGCATGG TATTCGGGCG CGCGCTCGGC TTCTTTGCTG GGTGGGCCCT GCTGGTGCTG
TGCTGTGTGT TCATGGTGTC CGCCATGATT CCGGCGGCAA ATGCCACGCT GCTCATCTTT
GATCGGCCCA TGATGAACAA CGTGCACTAC GTGACGTTGA TCGCGGCGGC ATGGCTCACG
TTTGTCAGTG TGGTGGTCGT CAAGGGCATC AAGCTCACCA GCTACGTGCA GGTGGTGATG
ACCCTCATCG AGGGCGTGAT CCTGCTCGGG ATCATCGTCG CGAGTTTCAT GGTGTTTCCG
CGTACGCCGC AGCACCCGTT CTCCTGGGTC TGGTTCTGGC CTTTCGCGTT CACACCCAAG
CTGTTTGCCA ACGGCGCGTT GGTGGCGATC TTCTTCTTTT ACGGCTGGGA CGTGACGATG
AACCTCAGCG AAGAGACGCG CGACGCGAAC CGTACGCCCG GCCGTGCCGC GTTCTGGTCG
ATGGTGTTCT TGATGGTGTT CTTCCTTGTC TTCATCGTCA TCACGCAGCT TGCGCTGTCC
GATGCCGAGA TCCAGCACTA CAACACGAAC ATCATCTTCG CCATTGCAGA GAAGCTGTTT
GGGCCGACCT GGGGCTACGT CGCGATCGTC GCGGTCTTGC TGAGCACGGT GGGCACGGTC
GAAACCCAGA TGCTGCAGTT CACGCGCACG CTCTTTGCCA AGAGCCGCGA CGGCGCACTG
CACGCACGCT ATGCGCGCCT GCATCCGGTT TGGCGCACGC CGCACATCGC CATCTTCTTC
ATCTGGCTGA CGGGGCTCGC ACTGCTGTTC GTGTCGTCCT ATCTGCCGAC GATCAACGTC
ATCCTGCACG ATTCGATTAC CGCCATCGGC TTCCAGATCT GCTTCTACCT GGGGCTCACG
GGGCTGGCCT GCGGCTGGTA CTACCGCAAG GTGCTGACGC AGGGGCCATG GGTCGCCATC
ACCCATGTCA TCTGGCCGGT GGCTAGTGGG CTCTTCCTCT TCTTCATCGC GCTCTACAGC
ATCCCGACCT TCGACTGGGT CACCAATATG GTGGGCATGG GCGGCATCGC CATCGGTGTC
ATTCCGCTGC TGCTGAACCG TAAAAAGATC TGGTCGGCTC GCTCCGCCTG A
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| Protein sequence | MDQPAKLNAD SLGIVESVIM GIAGTAPAYS IEITTSTIIG TAGTQSPASI LVCGLIMFGI
AYAFINMNRA LASAGTSYSW VSMVFGRALG FFAGWALLVL CCVFMVSAMI PAANATLLIF
DRPMMNNVHY VTLIAAAWLT FVSVVVVKGI KLTSYVQVVM TLIEGVILLG IIVASFMVFP
RTPQHPFSWV WFWPFAFTPK LFANGALVAI FFFYGWDVTM NLSEETRDAN RTPGRAAFWS
MVFLMVFFLV FIVITQLALS DAEIQHYNTN IIFAIAEKLF GPTWGYVAIV AVLLSTVGTV
ETQMLQFTRT LFAKSRDGAL HARYARLHPV WRTPHIAIFF IWLTGLALLF VSSYLPTINV
ILHDSITAIG FQICFYLGLT GLACGWYYRK VLTQGPWVAI THVIWPVASG LFLFFIALYS
IPTFDWVTNM VGMGGIAIGV IPLLLNRKKI WSARSA
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