| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3075 |
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| Symbol | |
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| ID | 8020758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3249800 |
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| End bp | 3251329 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644831871 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002983015 |
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| Protein GI | 241664655 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGTGGG CCAATCGCTC TCTAGTATAC GTACGACCGT ATATTAATGA ACCGAGATCC
CCCACGTCAA CGGAATCCCT TTCTGCTAGT AGCGTCGCCT CGCCAGCCAA ACGACATTGG
CCGGCGCTGG CGGCGCTGCT GACCGGCAAC TTCGTCACCA TTCTCGACCT GTTCATCGTC
AATGTGGCGA TTCCGGATAT CCGGGCGGGC CTGCACGCCA GTTTTGCCGA AATCCAGCTC
GTAATGGTCG GCTACAGCGC AGCGTATGCG GTGTTCCTGC TCAACGGCGC CCGCCTGGGC
GACCTGTATG GGCGCAGGCG CATGTTTCTG GCAGGCATGG CGCTGTTCAC GCTCGCATCT
GCGCTGTGCG GGCTGGCCAC CACGCCGTGG ATGCTGATCG CCATGCGTGT CGGCCAGGGC
CTGGGCGCGG CCATCCTCAT GCCCCAGGTG ATGGCCTCGC TGCGCGTGCT GTTTGACGGC
GATGCCCGGC GGCGCGCGTT CGGCACCATG GGCGCCGTAC AGGGCGTGGC GGCGTCAGTC
TCGCAAATCA TCGGCGGCTG GCTGATCGCG CATCCGCTGG CGGCCGACGT ATCCGGCTGG
CGTGCGGTGT TCCTGGTGAA TGTGCCGATC GGCATTGTGG CGCTCCTGGC GGCCCGCGCC
TTCGTGGCGG AATCGCGTGC GCCGGTGGCG GCGCGGCTGG ACGTGCACGG CGCCGTGGCG
GGTGCGGTGG CGCTGGCGAT GCTGCTGGTG CCGATCATGC AGGGCCGCGA ATCCGGCTGG
CCGTGGTGGT CGTGGGTGCT GCCGCTGGCC TCGCTGCTGG TGTTCCGCCA CTTTGTGCGG
GTGGAGCAAG CGCTGTCGGC GGCGGGCCGC GTCCCGATCA TCGAGATGGC GCTGTTCCGC
AACCGCAGCT TTGTGCTGGG CGTGCTGGCG ATCTTCCTGT TCTACACGGC CATCAGTTCG
TACTTCCTGG CGCTGACGAT CCTGCTGCAG TTCGGGCGCG GCCTGTCGGC GCTGGCGGCG
GGGCTGGTGT TTACGCCCGC GGCCATCGCG TTCTTTACCG GCTCGCTGAA AGCGCCCCGT
CTGGCTGAGC GCATCGGGCA GCGTGCCCTG CTGCTGGGGG TGGCCACCTT CGCCGTGGGC
ATGGTCGTGC TGGCCACCAT GGCGCAGTTG GGCGCGGGTA CCGCCTGGCT GATCCTGCCG
CTGATGCTCA ACGGCTTCGG GCAAGGCATG GTGATTCCGC TGTCGCTCAA CACCATCCTG
AGCGGCGTCG AAACGGCCCA GGCCGGCATG GGCGCCGGTA CGGTGACGAC CATGCAGGCC
GTTGGCAACG CGGTGGGCGT CACGGTGGTG GGCGTGCTGC TGTTCTCGCT GCTCGGCCAG
GTGGATGGGG CCGATGGCGC GGTCGCGGTG GACGCGGCAA CACACGCTGC GCACTACGGC
CACGCGTTCG CGCTGGCCAC GCTCTACAAC GTGGGGGCGA CCGTGCTGTC CTTCGTGCTG
TTCTGGCGCG CGTGGCGCCG TCACGCCTGA
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| Protein sequence | MTWANRSLVY VRPYINEPRS PTSTESLSAS SVASPAKRHW PALAALLTGN FVTILDLFIV
NVAIPDIRAG LHASFAEIQL VMVGYSAAYA VFLLNGARLG DLYGRRRMFL AGMALFTLAS
ALCGLATTPW MLIAMRVGQG LGAAILMPQV MASLRVLFDG DARRRAFGTM GAVQGVAASV
SQIIGGWLIA HPLAADVSGW RAVFLVNVPI GIVALLAARA FVAESRAPVA ARLDVHGAVA
GAVALAMLLV PIMQGRESGW PWWSWVLPLA SLLVFRHFVR VEQALSAAGR VPIIEMALFR
NRSFVLGVLA IFLFYTAISS YFLALTILLQ FGRGLSALAA GLVFTPAAIA FFTGSLKAPR
LAERIGQRAL LLGVATFAVG MVVLATMAQL GAGTAWLILP LMLNGFGQGM VIPLSLNTIL
SGVETAQAGM GAGTVTTMQA VGNAVGVTVV GVLLFSLLGQ VDGADGAVAV DAATHAAHYG
HAFALATLYN VGATVLSFVL FWRAWRRHA
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