Gene Rpic12D_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3074 
Symbol 
ID8020757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3249150 
End bp3249758 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID644831870 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002983014 
Protein GI241664654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA CCGACGGCCG CCGCCAGCGT GGCGAACGTG CGCGCGCCCA GGTGCTCGAG 
CACGCCACCG CCATCGCGTC CACCGACGGG TTGGAGGGCC TCACCATCGG CCGGGTGGCG
ACCGACGCCG GCGTGGGCAA AGGCAACATC CAGGTGCTCT TCGGCGACAA GGAAACGCTG
CAGCTCGCCA CCCTCGACGC TGGGGTCGTG CATTACCGCG CGACGGTGGT CGAGCCCGCG
CTGGCGCTGG AGAGCCCGCT TGCCCGCCTG CGGGCGCTGA CCGACGGCTG GTTCGACTAC
GTGGCCAGCG GCGCATCGCC AGGCGGCTGC TTTGTCTGCG CGGCCAGCTA CGAATACCGG
GCCCGCCCGG GCGCGATCCA GGATCGTGTG CGCGGACACC GCGAGTCGGT GCGTGCGCGG
TTTCGCGAGA CGATCACCGC CGCACAGGCC GCCGGAGAAT TGCGCGCCGA TGTCGACGTC
GATCAGCTCG TCTTCGAGAT CGAATCGTTT CGCTCCAACG CAAACGTGGC GTTTCTGATG
GGCGATATGG CGGTGTTCGA GCGCGCGCGC CGCAGCACGC AGGCGCGCAT CGATGCGGCG
CTGGCCTGA
 
Protein sequence
MNETDGRRQR GERARAQVLE HATAIASTDG LEGLTIGRVA TDAGVGKGNI QVLFGDKETL 
QLATLDAGVV HYRATVVEPA LALESPLARL RALTDGWFDY VASGASPGGC FVCAASYEYR
ARPGAIQDRV RGHRESVRAR FRETITAAQA AGELRADVDV DQLVFEIESF RSNANVAFLM
GDMAVFERAR RSTQARIDAA LA