| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3058 |
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| Symbol | |
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| ID | 8020741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3228506 |
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| End bp | 3232066 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644831854 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_002982998 |
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| Protein GI | 241664638 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCC CTCTGAACGA CGCGCTACGC CGCGCGCTCG AAACTGTTTC CCTGGACGAC
AAGTACACGC TCGAGCGTGG CCGCATCTAC ATCAGCGGCA CGCAGGCACT GGTGCGTCTG
CCGATGCTGC AGCAGGAGCG CGACCGCGCC GCTGGGCTGA ACACGGCGGG CTTCATCTCC
GGCTACCGCG GCTCGCCGCT GGGGGCGCTG GACCAGGCCT TGTGGAAGGC CAAGAAGCAT
CTGGCCGGGC ACAACATCGT CTTCCAGGCG GGGCTCAACG AAGACCTGGC CGCCACGGCG
GTCTGGGGCT CGCAGCAGGT CAATCTGTAT CCGAGCGCCA AGTTCAGCGG CGTGTTCGGC
ATGTGGTACG GCAAGGGGCC GGGCGTGGAC CGCACGATCG ACGTGTTCAA GCACGCCAAC
TCGGCGGGCT CGTCCGCGCA TGGCGGCGTG CTGGTACTGG CAGGCGATGA CCACGCGGCC
AAGTCGTCGA CGCTGGCGCA CCAGTCCGAG CACGTCTTCA AGGCGGCCGG CATTCCGGTG
CTGTATCCGT CGAACGTGCA GGAATACCTC GACTACGGCC TGCACGGCTG GGCGATGAGC
CGCTACTCAG GCCTGTGGGT CTCGATGAAG TGCGTGACGG ACGTGGTGGA ATCGTCGGCG
TCGGTGGATG TCGATCCACA CCGTGCGCAG ATCATCCTGC CCGAGGATTT CGTCATGCCG
CAGGGCGGGC TGAACATCCG CTGGCCCGAT CCGCCGCTGG TGCAGGAAGC GCGGCTGCTC
GACTACAAGT GGTACGCCGG TCTGTCGTAC GTGCGGGCCA ACAAGCTGGA CCGCGTGGTG
CTCGATTCGC CGCAGGCGCG CTTCGGCATC ATGACCGCCG GCAAGGCGTA CCTGGACGTT
CGCCAGGCGC TGGTCGACCT CGGCCTCGAT GACGACACCT GCCGCCGCAT CGGCATCCGC
CTGTACAAGG TCGGCTGTGT ATGGCCGCTG GAAGCACATG GCGCGCGTGC CTTTGCCGAG
GGCCTGCAAG AGATCCTGGT GGTGGAAGAG AAGCGCCAGA TCCTGGAATA CCAACTGAAG
GAAGAGCTGT ACAACTACCG CGACGACGTG CGTCCGCGCG TGTACGGAAA GTTTGACGAA
AAAGACAATG CCGGCGGCGA ATGGTCGGTG CCGATGGCCA ACTGGCTGCT GCCGGCGCAT
TACGAACTGT CGCCCGCGCT CATCGCGCGC GCCATCGCCA CGCGCCTGGA AAAGTTCGAG
CTGCCGTCGG ACGTGCGCGC ACGCATTGCC TCGCGCATCG CCATCATCGA CGCCAAAGAA
AAAGCGCTCG CCAAGCCGCG CATTACCGCC GAGCGCAAGC CGTGGTTCTG CTCGGGCTGC
CCGCACAACA CGTCGACCAA CGTGCCGGAA GGCTCGCGCG CGCTGGCCGG CATCGGCTGC
CACTACATGA CCGTGTGGAT GGATCGCCGC ACCGACACCT TCAGCCAGAT GGGCGGCGAA
GGCGTGGCGT GGATCGGTCA GATGCCGTTT TCGGGCGACC AGCACGTGTT CGCCAACCTC
GGCGACGGCA CGTATTACCA CTCGGGCCTG CTGGCGATTC GTGCCTCCAT CGCGGCCAAG
GTGAACATCA CCTACAAGAT CCTCTACAAC GACGCCGTGG CCATGACGGG CGGCCAGCCG
GTCGACGGCC CGCTGTCGGT GCCGCAGATT GCCGCGCAGG TCTACGCCGA AGGCACGTCG
CGCATCGTCA TCGTCACGGA CGAGCCGGAG AAGTACAACG CCGCCATCAA GCTGCCCGAA
GGCGTAACGG TGCACCACCG TGATCGCCTT GACGCCATTC AGCGCGAGCT GCGCGAGGTG
CAGGGCACCA GCGTGTTGAT CTACGACCAG ACCTGCGCGA CGGAAAAGCG CCGCCGCCGC
AAGCGCGGCA CGATGGTTGA TCCGGCCCGC CGCGCGTTCA TCAACGACGC CGTGTGCGAA
GGCTGCGGCG ATTGCTCGGT CAAGTCGAAC TGCCTGTCGG TCGAGCCGCT GGAAACGGAG
CTGGGCACGA AGCGCAAGAT CAACCAGTCG TCGTGCAACA AGGATTTCTC GTGCGTGAAC
GGCTTCTGCC CGAGCTTCGT GACGGCCGAG GGCGCGCAGG TGCGCAAGCC GGAGTCGCAC
GGCGTGTCGA TGGAAGGCTT GCCGCTGCTG CCGCATCCTG AGCTGCCCGC CATCCAGCGC
GCGTACGGCG TGCTGGTGAC CGGTGTCGGC GGCACGGGCG TGGTGACGAT CGGCGGCCTG
CTCGGCATGG CCGCGCACAT CGAAGGCAAG GGCGTGACCG TGCTCGACAT GGCGGGCCTG
GCGCAGAAAG GCGGCGCGGT GCTCTCGCAC GTGCAGATTG GCGAGCGCCC CGATTCAATC
CACGCCACGC GCATCGCCAT GGGCGAGGCG GACCTCGTGA TCGGCTGCGA CGCGATTGTC
TCGGCGTCGG ATGAAGTGCT GTCGAAGGTG CAGCACGGTC AGACGCGCGC CATCATCAAC
AGCACGGCAT CACCCACGGC CGACTTCATC AAGAACCCGA ACTGGCGCTT CCCGGGCAGC
TCGGCAGAGG CGGACATCCG CGCTGCCGTC GGCGACGCCT GCGCGTTTGA AGACGCCAAC
ACGCTGGCCG TGCGCCTGCT GGGCGACGCC ATCTTCACCA ACCCGCTGGT GCTCGGCTTT
GCGTGGCAAA AAGGCTGGGT TCCGCTGACG CACGACGCGC TCATCCGCGC GATCGAACTC
AACGGCGTGG CCGTCGAGAA GAACAAGACC GCGTTCGAAT GGGGCCGCCA CCTCGCGCAA
GACCGCGAGG CGGTGCTCAA GCTCGCCGGC GACGCACCGC GTGCCAAGGC CGACGTCATC
GCCCTGCCCT CGCTCGACAC GCTGATCGCC CGCCGCGTCG ATCTGCTGAC CGCCTACCAG
AATGCTGCAT ATGCCGCTGA ATTCCGCGCG GTGGTCGAGC GCGTGCGTGC AGCAGAGGCC
GCCGTGGTGG GGGCCGGCCA ACCCCTGGCG CTCACGGAAG CGGTGGTGCG CAACCTGTCG
AAGCTGATGG CGTACAAGGA CGAATACGAA GTCGCCCGCC TGTACACCGA TCCGGCCTTC
CTCGACAAGC TGCGCGCCCA GTTCGAAGGC GAACCCGGCC GCGACTACCA GCTCAACTTC
TGGCTCGCGC CACCCATGAC GGCCAAGCGT GACGAGAAGG GCCACCTGGT CAAGCAACGC
TTCGGTCCGA ACACGATGCG CATCTTCAAG GTGCTCGCCA AGCTCAAGGG CCTGCGCGGC
ACGGCGTTCG ACATCTTCGG CAAGACCGAA GAACGCCGCA CCGAGCGCGC GCTGATCGGC
GAATACCGCG CGCTGGTCGA TGAACTGGCG AAAGGCCTGA CGGCGCAGAA GCTGGCGCAA
GCCGTGGAAC TGGCCCGCCT GCCGGAGGAC ATCCGCGGCT TCGGCCATGT GAAGGAGGCC
AACCTGGCTG CGGCGCGCAT CCGCTGGAAC AAGCTGCTGG CACAGTGGCG TGATCCGGCG
GCGGCACAGC AGGCGGCCTG A
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| Protein sequence | MNAPLNDALR RALETVSLDD KYTLERGRIY ISGTQALVRL PMLQQERDRA AGLNTAGFIS
GYRGSPLGAL DQALWKAKKH LAGHNIVFQA GLNEDLAATA VWGSQQVNLY PSAKFSGVFG
MWYGKGPGVD RTIDVFKHAN SAGSSAHGGV LVLAGDDHAA KSSTLAHQSE HVFKAAGIPV
LYPSNVQEYL DYGLHGWAMS RYSGLWVSMK CVTDVVESSA SVDVDPHRAQ IILPEDFVMP
QGGLNIRWPD PPLVQEARLL DYKWYAGLSY VRANKLDRVV LDSPQARFGI MTAGKAYLDV
RQALVDLGLD DDTCRRIGIR LYKVGCVWPL EAHGARAFAE GLQEILVVEE KRQILEYQLK
EELYNYRDDV RPRVYGKFDE KDNAGGEWSV PMANWLLPAH YELSPALIAR AIATRLEKFE
LPSDVRARIA SRIAIIDAKE KALAKPRITA ERKPWFCSGC PHNTSTNVPE GSRALAGIGC
HYMTVWMDRR TDTFSQMGGE GVAWIGQMPF SGDQHVFANL GDGTYYHSGL LAIRASIAAK
VNITYKILYN DAVAMTGGQP VDGPLSVPQI AAQVYAEGTS RIVIVTDEPE KYNAAIKLPE
GVTVHHRDRL DAIQRELREV QGTSVLIYDQ TCATEKRRRR KRGTMVDPAR RAFINDAVCE
GCGDCSVKSN CLSVEPLETE LGTKRKINQS SCNKDFSCVN GFCPSFVTAE GAQVRKPESH
GVSMEGLPLL PHPELPAIQR AYGVLVTGVG GTGVVTIGGL LGMAAHIEGK GVTVLDMAGL
AQKGGAVLSH VQIGERPDSI HATRIAMGEA DLVIGCDAIV SASDEVLSKV QHGQTRAIIN
STASPTADFI KNPNWRFPGS SAEADIRAAV GDACAFEDAN TLAVRLLGDA IFTNPLVLGF
AWQKGWVPLT HDALIRAIEL NGVAVEKNKT AFEWGRHLAQ DREAVLKLAG DAPRAKADVI
ALPSLDTLIA RRVDLLTAYQ NAAYAAEFRA VVERVRAAEA AVVGAGQPLA LTEAVVRNLS
KLMAYKDEYE VARLYTDPAF LDKLRAQFEG EPGRDYQLNF WLAPPMTAKR DEKGHLVKQR
FGPNTMRIFK VLAKLKGLRG TAFDIFGKTE ERRTERALIG EYRALVDELA KGLTAQKLAQ
AVELARLPED IRGFGHVKEA NLAAARIRWN KLLAQWRDPA AAQQAA
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