Gene Rpic12D_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3056 
Symbol 
ID8020739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3225981 
End bp3226664 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID644831853 
Producthypothetical protein 
Protein accessionYP_002982997 
Protein GI241664637 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CAGAGCCCAC ATCGCCCACC GCACGGACCC GCGTGCGCCG CGTCGCGCAC 
CGCGGCCACT ACGACCGCAC CACGCTGCAT GCCATCCTTG ACGAGGCCTA CGTCTGCCAC
ATCGCCTTCG CCGACGAGCA TGGCGTGCAT TGCATCCCCA CCGCGTGCTG GCGCGAGGGC
GGTCATCTCT ACATCCACGG TTCCAACGGC AGCCGCATGC TCAGGTTGGC AGGTAGCGGC
GCGCAGGTCT GCGTGACCGT CACGCACCTC GATGGCCTGG TGCTGGCGCG CTCGGCGTTC
AACCATTCGA TGAACTATCG GTCGGCCGTT ATCTATGGCG CGTTCGAAAT CGTGCCGGAT
TCGCAGAAGC CTGCGGTGCT CGATACGTTC ATGGAAGTGC TCGCGCCTGG CCGTTCGCAG
CAGGCACGGC CGGGCAATGC CAAGGAACTG GCCGCCACGA CCGTGCTGCG GATTCCGCTG
GATGAGGCGG CGTGCAAAGT GCGCACGGGC GGGCCGAAGG ATGATGCTGA AGACCTTGAG
TTGCCTGTGT GGGCTGGGGT GCTTCCGATG GCGCTGTTGC CGTTGCCGCC GGTGGTGCAG
GCCGCGCCTG CGGGTACACC TGACTATGTG CGGGAGTGGA GGGATAGTGC GCGGGTGCCG
GTGGGGGATG TGGTGATGTC GTGA
 
Protein sequence
MSTTEPTSPT ARTRVRRVAH RGHYDRTTLH AILDEAYVCH IAFADEHGVH CIPTACWREG 
GHLYIHGSNG SRMLRLAGSG AQVCVTVTHL DGLVLARSAF NHSMNYRSAV IYGAFEIVPD
SQKPAVLDTF MEVLAPGRSQ QARPGNAKEL AATTVLRIPL DEAACKVRTG GPKDDAEDLE
LPVWAGVLPM ALLPLPPVVQ AAPAGTPDYV REWRDSARVP VGDVVMS