Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3049 |
Symbol | |
ID | 8020732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3216144 |
End bp | 3217580 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644831846 |
Product | General secretion pathway L |
Protein accession | YP_002982990 |
Protein GI | 241664630 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.833008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGACCT CCCTGTACGT GCGCCTGCCG CACCGGCCCA TTCAATCGCC CGAACGCTGG TCGGCGGGCG CGCTTGCCTC CGTGCCCTTC GCGCTGGTGC GCGAAGAAGG CGCACAAGGG CCGCAGCGCG TTCAGCGCGA AGGCACGTCG CGCACCGACG AGTTGCCGGC GGCCGATCGC CTGATCCTTT TGCTGCCCGC CGCCGATGTG CTGCTGGTGC CGGCCAACGT GCCGCCGCTG GCGCTGCCCA AGCTGCGTCT TGCGCTGCCC AACCTGGTGG AAGAGCGCCT CGTGCAGGAC GCGCAGCAAT GCCATATCGC CCTTGGGCCC CGCTTGGGGG ATGCCCCGGC CCGTGGCTGG CGGGCACCCC GCGAGCCGCA ATCGCGCGCA CTGATGATTG CCGACCGCGC GTGGGTCCGC TTCATCCTCG ATACCTTTGC TGGCCACAAG CACCGCACCT GCCATCTGCT GCCTGCGCAG CTTTGCGTGC CGTTTGAAAC GCCTGTCGCA GCGGCAGCGC CGGTTGCAGA AGCGGCAAAC GCCGTCGAAC GCGCGGAGCC GTCGCTCGAT GCTTCCGTTG CCGCCGAGCC TGCAGTCGAA TTGCCCGCGG CTGAAGCCGT GGCTGGGGTC ACACCGGCCA CCATCGCGCT TGACGCGGCG CCGTCGTCCG ACCCGGACGC GCCCGTGGCC GTCGACATCA CCGTACGCAC GGGCCGCGCC GAGGGCTACG GCCTGCGGCT GCTGCCGGCC AACGTCGGCA ACTGGCTGGG CATTGCGCCC GCGCCGGCCA CGCTGATGGT GTCGCCGGCC CTGCGCGAGT TGGCGCCCGG CCTGTCGGCC GACCCCGCCA CCGCCACGCT GGACTGGTCC ACCTGGGCGG CCGGCGCCCG CGACGCCCTC GCCTCAGGCG AAGCCGATCT CTGCCAGTTC GACTTTGCAC GCGGCGGCGT GGCCGGCATG GACTGGAGCC TCTGGCGCCT GCCCATCGCG CTGGCCGTGC TCATCGTGGT CGTGCAGCTC ATCGGCATGA ACGCGCGCTG GCTCACGCTG CGTGCCGAAC AGAAGCGGCT CGATACCGCC ATGCGCGCGC AGCTGCAGAC GGCATTCCCG AATACGCCGG TGATCCTCGA CCCGCCCGCG CAGATGCGCC GCCAGGTCGA ACAACTGCGG CTGGCCGCCG GCAAATCGGC ACCGGAAGAC TTCCTGCCGC TGGCCGATCG CTTTGCCCAG GCGGCCACCG GCCTCGCGCC CGATGCGCTG CTCGCGCTCG ATTACCACGG CCGCGCGCTC ACGGTCACGC TCAAGGACGG CACCGACACC GCCAGCCTGC GCACCGCCGC CCGCAATGTC GGCCTGAACA TGGACACCGC CGAGGCCCCG CGCGGTGCCG AGGCGACCGT ACCGGGCTCG CGCTGGACGG TCTCCATCGC CCAATAA
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Protein sequence | MTTSLYVRLP HRPIQSPERW SAGALASVPF ALVREEGAQG PQRVQREGTS RTDELPAADR LILLLPAADV LLVPANVPPL ALPKLRLALP NLVEERLVQD AQQCHIALGP RLGDAPARGW RAPREPQSRA LMIADRAWVR FILDTFAGHK HRTCHLLPAQ LCVPFETPVA AAAPVAEAAN AVERAEPSLD ASVAAEPAVE LPAAEAVAGV TPATIALDAA PSSDPDAPVA VDITVRTGRA EGYGLRLLPA NVGNWLGIAP APATLMVSPA LRELAPGLSA DPATATLDWS TWAAGARDAL ASGEADLCQF DFARGGVAGM DWSLWRLPIA LAVLIVVVQL IGMNARWLTL RAEQKRLDTA MRAQLQTAFP NTPVILDPPA QMRRQVEQLR LAAGKSAPED FLPLADRFAQ AATGLAPDAL LALDYHGRAL TVTLKDGTDT ASLRTAARNV GLNMDTAEAP RGAEATVPGS RWTVSIAQ
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