| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3049 |
|---|
| Symbol | |
|---|
| ID | 8020732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3216144 |
|---|
| End bp | 3217580 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644831846 |
|---|
| Product | General secretion pathway L |
|---|
| Protein accession | YP_002982990 |
|---|
| Protein GI | 241664630 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3297] Type II secretory pathway, component PulL |
|---|
| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.833008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGACCT CCCTGTACGT GCGCCTGCCG CACCGGCCCA TTCAATCGCC CGAACGCTGG
TCGGCGGGCG CGCTTGCCTC CGTGCCCTTC GCGCTGGTGC GCGAAGAAGG CGCACAAGGG
CCGCAGCGCG TTCAGCGCGA AGGCACGTCG CGCACCGACG AGTTGCCGGC GGCCGATCGC
CTGATCCTTT TGCTGCCCGC CGCCGATGTG CTGCTGGTGC CGGCCAACGT GCCGCCGCTG
GCGCTGCCCA AGCTGCGTCT TGCGCTGCCC AACCTGGTGG AAGAGCGCCT CGTGCAGGAC
GCGCAGCAAT GCCATATCGC CCTTGGGCCC CGCTTGGGGG ATGCCCCGGC CCGTGGCTGG
CGGGCACCCC GCGAGCCGCA ATCGCGCGCA CTGATGATTG CCGACCGCGC GTGGGTCCGC
TTCATCCTCG ATACCTTTGC TGGCCACAAG CACCGCACCT GCCATCTGCT GCCTGCGCAG
CTTTGCGTGC CGTTTGAAAC GCCTGTCGCA GCGGCAGCGC CGGTTGCAGA AGCGGCAAAC
GCCGTCGAAC GCGCGGAGCC GTCGCTCGAT GCTTCCGTTG CCGCCGAGCC TGCAGTCGAA
TTGCCCGCGG CTGAAGCCGT GGCTGGGGTC ACACCGGCCA CCATCGCGCT TGACGCGGCG
CCGTCGTCCG ACCCGGACGC GCCCGTGGCC GTCGACATCA CCGTACGCAC GGGCCGCGCC
GAGGGCTACG GCCTGCGGCT GCTGCCGGCC AACGTCGGCA ACTGGCTGGG CATTGCGCCC
GCGCCGGCCA CGCTGATGGT GTCGCCGGCC CTGCGCGAGT TGGCGCCCGG CCTGTCGGCC
GACCCCGCCA CCGCCACGCT GGACTGGTCC ACCTGGGCGG CCGGCGCCCG CGACGCCCTC
GCCTCAGGCG AAGCCGATCT CTGCCAGTTC GACTTTGCAC GCGGCGGCGT GGCCGGCATG
GACTGGAGCC TCTGGCGCCT GCCCATCGCG CTGGCCGTGC TCATCGTGGT CGTGCAGCTC
ATCGGCATGA ACGCGCGCTG GCTCACGCTG CGTGCCGAAC AGAAGCGGCT CGATACCGCC
ATGCGCGCGC AGCTGCAGAC GGCATTCCCG AATACGCCGG TGATCCTCGA CCCGCCCGCG
CAGATGCGCC GCCAGGTCGA ACAACTGCGG CTGGCCGCCG GCAAATCGGC ACCGGAAGAC
TTCCTGCCGC TGGCCGATCG CTTTGCCCAG GCGGCCACCG GCCTCGCGCC CGATGCGCTG
CTCGCGCTCG ATTACCACGG CCGCGCGCTC ACGGTCACGC TCAAGGACGG CACCGACACC
GCCAGCCTGC GCACCGCCGC CCGCAATGTC GGCCTGAACA TGGACACCGC CGAGGCCCCG
CGCGGTGCCG AGGCGACCGT ACCGGGCTCG CGCTGGACGG TCTCCATCGC CCAATAA
|
|---|
| Protein sequence | MTTSLYVRLP HRPIQSPERW SAGALASVPF ALVREEGAQG PQRVQREGTS RTDELPAADR
LILLLPAADV LLVPANVPPL ALPKLRLALP NLVEERLVQD AQQCHIALGP RLGDAPARGW
RAPREPQSRA LMIADRAWVR FILDTFAGHK HRTCHLLPAQ LCVPFETPVA AAAPVAEAAN
AVERAEPSLD ASVAAEPAVE LPAAEAVAGV TPATIALDAA PSSDPDAPVA VDITVRTGRA
EGYGLRLLPA NVGNWLGIAP APATLMVSPA LRELAPGLSA DPATATLDWS TWAAGARDAL
ASGEADLCQF DFARGGVAGM DWSLWRLPIA LAVLIVVVQL IGMNARWLTL RAEQKRLDTA
MRAQLQTAFP NTPVILDPPA QMRRQVEQLR LAAGKSAPED FLPLADRFAQ AATGLAPDAL
LALDYHGRAL TVTLKDGTDT ASLRTAARNV GLNMDTAEAP RGAEATVPGS RWTVSIAQ
|
|---|
| |