| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3047 |
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| Symbol | |
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| ID | 8020730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3214170 |
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| End bp | 3214892 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644831844 |
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| Product | general secretory pathway J transmembrane protein |
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| Protein accession | YP_002982988 |
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| Protein GI | 241664628 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.353213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTA ACCGTTCGTC GCGCGGCTTC ACCCTGCTCG AGCTGCTGGT GGCGATCACG
CTGCTGGCCA TCCTGGCCGT GATTGCTTGG CGCGGGCTGG ACAGCATGAC GCGCACGCAC
GAGGCGCTGG CCCAGCGCGA CGAACGCATC GAGGCACTCA AGACGGCCTA CGCCCAGTTC
GATGCCGATT GCACCCAACT GGCCGATCCG AACACGCTGT CGCGCTCACC GGTGGAGGTC
GACGCCAACC GCGTGCTGAT GGTGCGCGAC CGCCGCGACG ACAGCCAGCC ACCCGCGTGG
CAAGTGGTGC TCTACCGCAT CGTCGACGGC CGGCTCGAAC GCCTCCAGAC CCAACCGATC
ACCAACCGCG GCGACCTGCG CAATGCGATG GACAACCTGC GCCAGGGCGG CGTGGGCGCG
GCGCGCTACC TGCTCGCCGC CAACGTTGAC AGCATCAGCG CGCGCGCGTG GATCGAACCC
GGCGGCTGGA TGGAAAACAC GGGCGCGCTG TCGGCGGCAC TGTTCCCGGC CGGTAGCAAC
ACCACCACCC TCACCGGCTT GCCGTCGGCT TCCACGCCCA GCGCGTCGGC GCCCTCGGCC
AACAGCCCCG GCGTGGTGGT GCCGGCCGCC TCGGTGCGCG CGGTGGAACT GGCGTTGCTC
GTGCGCATGA CGCCGCAGGG CGCGCCGCAG CGCTTCACGC GCATCTGCAT GACGGGGCTT
TGA
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| Protein sequence | MSSNRSSRGF TLLELLVAIT LLAILAVIAW RGLDSMTRTH EALAQRDERI EALKTAYAQF
DADCTQLADP NTLSRSPVEV DANRVLMVRD RRDDSQPPAW QVVLYRIVDG RLERLQTQPI
TNRGDLRNAM DNLRQGGVGA ARYLLAANVD SISARAWIEP GGWMENTGAL SAALFPAGSN
TTTLTGLPSA STPSASAPSA NSPGVVVPAA SVRAVELALL VRMTPQGAPQ RFTRICMTGL
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