| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3043 |
|---|
| Symbol | |
|---|
| ID | 8020726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3211930 |
|---|
| End bp | 3212613 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644831840 |
|---|
| Product | putative general secretion pathway related transmembrane protein |
|---|
| Protein accession | YP_002982984 |
|---|
| Protein GI | 241664624 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.429926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTC GACAGTCGTC CCGCCTGCTC AGTCTCGTAC TGTTTGCTGC CCTCTGTGCG
CTCCTGACGC ACTGGGTGCT GACGCTGTCG TCGCTGCGCT CGCTGGGCGC GCCGCGTGAG
GCCCGCGTGG CCCAAACGGA TGCCTTGGAG ACCGGCGCGG CCGTCACGCT CTTTGGCGGG
GGCCCGCAGA ACGGCCCGCG CGATGTGCAG GTGATGGGCG TGGTGGCGGA TCTGGCCGAT
GGTTCCGGCG CCGCCATCGT GTCGGTGGAC GGCGGTGCGC CGCAGGCCGT GCGCGCCGGC
AAGTCGCTGT CGTCCAATCT CAAGCTGGTG GAAATCAAGG CGCGCTCGGT GGTGATCGAG
CGTAATGGCG CGCGCCAGGA GATTCCGCTG CCGGCCAGCG CCGTGGCGGG CGTCTCGCCG
GCCAATCGCA ATGCGCCGGC CATGCCTCTG CCCCCCGCAG GTGCCGCGGC ACCGCTGTCC
ACTCCCGCAA TGCCGCCCGC ACCGTCAGTT GCCAACAACC CGGCCAACAC CACCATGCCG
GGCGCCATGC TCCCCATCGC GCCCGCGCAG ATCAACACCG GGGACGAGCC TGCCGGCCAA
GGCGGCGGCA TCGTCGGCCC CCGCCACCGC GCAGCAGCCG CTGCACGCAA GGGGGACACC
CCCCAACCGG GCGCCGACCA ATAG
|
|---|
| Protein sequence | MNARQSSRLL SLVLFAALCA LLTHWVLTLS SLRSLGAPRE ARVAQTDALE TGAAVTLFGG
GPQNGPRDVQ VMGVVADLAD GSGAAIVSVD GGAPQAVRAG KSLSSNLKLV EIKARSVVIE
RNGARQEIPL PASAVAGVSP ANRNAPAMPL PPAGAAAPLS TPAMPPAPSV ANNPANTTMP
GAMLPIAPAQ INTGDEPAGQ GGGIVGPRHR AAAAARKGDT PQPGADQ
|
|---|
| |