Gene Rpic12D_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3040 
Symbol 
ID8020723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3209205 
End bp3209693 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID644831837 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002982981 
Protein GI241664621 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG TGGAACTCGA CAAGATCGAC CGGAAGATCC TGGAAGTCCT GCAGAACAAC 
GGCCGCCTCA CCAATCTGGA AGTCGCCGAG CGGGTGAATC TGTCGCCCAG CCCGTGTTTG
CGACGCATCC GCCGCCTGGA GGAATCCGGC GTCATCCGCC AGTACGCCGC GCTGCTCGAC
CCGTCCAAGA TCGGGTTGGG GCTGTCGGCG TACATCAACG TGCGGCTGGA GAAGCAGGGC
GGTGCGCCCA AGGGGAAAGG CCCGTCCGAT ATTTTTCGCG CCGCCGTGGC GACGTGGCCC
GAGGTGGTCA CGTGCTACGC CATGACCGGC GAGATGGATT ACCTGCTCAA GGTGTTCGTG
GAAGACATGG AGCACTTCGC GCGCTTCATC CGCGACCAGC TGCTCGCCCA CCCGGCAGTG
ATCGATGTGA AGAGCAGTTT TGCGCTGGAG CGGATCAAGG ATACGACTGC GTTGCCGGTG
GTGGTTTGA
 
Protein sequence
MNKVELDKID RKILEVLQNN GRLTNLEVAE RVNLSPSPCL RRIRRLEESG VIRQYAALLD 
PSKIGLGLSA YINVRLEKQG GAPKGKGPSD IFRAAVATWP EVVTCYAMTG EMDYLLKVFV
EDMEHFARFI RDQLLAHPAV IDVKSSFALE RIKDTTALPV VV