| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3015 |
|---|
| Symbol | |
|---|
| ID | 8020697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3184303 |
|---|
| End bp | 3185199 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644831811 |
|---|
| Product | FF domain protein |
|---|
| Protein accession | YP_002982956 |
|---|
| Protein GI | 241664596 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3687] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCAG TCCGTCGCGA CGTGCATCCT CACCTGCCGG CTGATCGCAT CAGCAACTGG
CACGAGCGAG GCCCGCACGT GACCCACTTC CTGAACGCGC TGTCGATCTT CTTCCCGACC
GGCGAGCGCT TCTTCATGGA CAGCGTGCGC AACTACCGCC ATCTGGTGAC CGACCCCGAA
CTGAAGCAAG CCGTGGCCGG CTTCATCGGG CAGGAAGCCA TGCACACGCG CGAACACGTG
CTGTACAACG ACCTGCTCGA TCGCGCCGGC CTGCCTGCCA CGCGCATCGA CCGGTTTATT
GGCAAGTTCC TGAATGTGCT GCGCAAGTGG ACCCCGAAGT CGCACCAACT GGCCGTGACC
GTGGCGCTCG AGCACTACAC CGCCATGCTG GCCGGCCAAG TGCTTTCACA TGAAGATGGC
CTGGGCCGCA ATTCGGAATC GGGCTATCGC CAGGTCTGGC TGTGGCACGC CATGGAAGAG
ACCGAGCACA AGGCCGTCAG TTACGACGTA TGGAACCTGG CCATCAAGCC GGGCGTCGGC
CGATACCTCA CGCGCACGCT GACGATGTTG GTGACGACCG TTACCTTCTG GGCGATGGTG
TTCTACGTGC ACTTGCGGCT GATCTTTGCG GACCGCACCG TCAAGCACAA ATTCCTCGGC
CTCGGTAAGG CGTTCCATTT CCTGTGGATT CACCCGGCGC CGCTGCGCAA GATCATCCCG
GAATTCTTCG ACTTCTTCCG GCCCTCGTTC CACCCGTGGG ATGAAGACAA CCGTGACGCA
CTGGAACGCC TGCCCAAGCT GATCTCGGAA ATTGAAGCGT ACGCCGCTGC AAACGGCGAA
GCGCCGTCGC CATCGATCCG CCGCAAGCTG TCGACGGCGG GCGCGGCCGG ATCTTGA
|
|---|
| Protein sequence | MMPVRRDVHP HLPADRISNW HERGPHVTHF LNALSIFFPT GERFFMDSVR NYRHLVTDPE
LKQAVAGFIG QEAMHTREHV LYNDLLDRAG LPATRIDRFI GKFLNVLRKW TPKSHQLAVT
VALEHYTAML AGQVLSHEDG LGRNSESGYR QVWLWHAMEE TEHKAVSYDV WNLAIKPGVG
RYLTRTLTML VTTVTFWAMV FYVHLRLIFA DRTVKHKFLG LGKAFHFLWI HPAPLRKIIP
EFFDFFRPSF HPWDEDNRDA LERLPKLISE IEAYAAANGE APSPSIRRKL STAGAAGS
|
|---|
| |