Gene Rpic12D_3014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3014 
Symbol 
ID8020696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3183284 
End bp3184306 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID644831810 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002982955 
Protein GI241664595 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGG CCACCACCGG CGAACTGTTC GCCAGCCCCC CGCGCGCGAA TCTGCTCAAT 
GTCGCCCGCG CGATGCTGCG TCCCGGCCGC ATCGGCCTGC GCAGCATCGG GCGCGACGTG
CTGATCGCGC GCTACGCCAA GCCGCAATCG CGCTACCTGC CACTGATGGG CACGCGCGTG
CATTACACCG ATGAAGGTGC CGCCAATTCC GAAGGCACGT TGCTGCTGAT CCACGGCTTT
GGCGCATCGC TGCACACGTG GGATGGCGTG CTGCCGCAAC TCACGCGGCG CTATCGCGTG
ATCCGGCTCG ACCTGCCGCC GTTCGGCATC ACCGGCCCAC TGCGCGACGC TCAGGGCCGC
CCGCGCACGA TGGAGCTGCC GCTGTACCGC GACTTCATCG ACGCGTTTGT CGACACGCTC
GGCCTGTCGA AACTCACGCT GATCGGCAAT TCGCTGGGCG GCATGGTGTC GTGGGACTTT
GCCGTGCGGC ACCCGGGCCG CATCGAGAAG CTCGTGCTGA TCGACTCCGC CGGCTTCCCG
ATGAAGCTGC CGATCTACAT CGATCTGTTC AATCACATTG GCGTGCGGAT GACGTCGCCG
TGGATGCTGC CCGAGGGGAT CATCCGCGCC GCCACGCGCG ATGTGTATGG CGACCCGTCG
CGCGTGTCCG AACCCACGCT GCGCCGCTAC GCCGATTTCT TCTATGCCGA CGGTGCACGA
CAGGCCATCG GCAAGATGGT GCCGAAGTTC CGCTTTGACG ATGTCGATAC CAGCGGGCTG
GCCTCGATCC GAGTGCCCAC GCTCATCCTC TGGGGCCAGC GCGACCGGTG GATCCCGCCC
GCGCATGCCG GCGAATTCGC CCGCCGCATT CCCGGCGCCA CGCTGCGCAT GTACCCGGCG
CTCGGCCATA TCCCGATGGA GGAAGACCCC GTACGCGTGG GGACCGACCT CTGTGCATTC
CTCGATCAGG GGCGCGCATC GACGCGCCTT TCAGAAACCA CATTCCAGGA GAACCGCCCA
TGA
 
Protein sequence
MDTATTGELF ASPPRANLLN VARAMLRPGR IGLRSIGRDV LIARYAKPQS RYLPLMGTRV 
HYTDEGAANS EGTLLLIHGF GASLHTWDGV LPQLTRRYRV IRLDLPPFGI TGPLRDAQGR
PRTMELPLYR DFIDAFVDTL GLSKLTLIGN SLGGMVSWDF AVRHPGRIEK LVLIDSAGFP
MKLPIYIDLF NHIGVRMTSP WMLPEGIIRA ATRDVYGDPS RVSEPTLRRY ADFFYADGAR
QAIGKMVPKF RFDDVDTSGL ASIRVPTLIL WGQRDRWIPP AHAGEFARRI PGATLRMYPA
LGHIPMEEDP VRVGTDLCAF LDQGRASTRL SETTFQENRP