| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3001 |
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| Symbol | |
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| ID | 8020683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3166534 |
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| End bp | 3168801 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831797 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002982942 |
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| Protein GI | 241664582 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.996341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTC ATTTTCTTTT CTGGACGCGG CGGCTGTGGC CGCTCGCATC GTTCCTGCTC
CTGCTGATGG CAGGTGTCGC CAACGTGGCC GATGCGGCGC CGGTGTCGTT TGCCAAGCTG
GCCGGGCTGC CGACTTCCAC CACCAGCGCA TCCGCGCCAG CGGCGGACCC CGCGCAGACG
CGCCAATCGC TCGACACCGT CATCACGCTG CTCAACAACG ACCAGCAGCG CACGGCCCTC
GTCAATGAAC TGAAGCAGTT GCGCGACGGC ATGAGCGCGC AGCAGAAGGT GCAGGCCGAA
CAGGCGCCGG GTTTGCTTGG CGCGGTGGCA TCGCTGATTG AGAACGGCTC GCTGCAGGCC
GATGTGGAAG CCGGTGCGCC GCGCTACTGG CTGCGCCGCA TCGAGGCCGC GAGCGGTAAC
GCGAGCCTGC TGGTCGCACC AGACAAGCGC ATGCCGCTGG TTGCCGACTT TGCGAGCACG
GTTGGCATCT GGGCGGCCAT TGCCGCTGGC CTGCTCGGCC TGGGTTGGCT GATCCGCCGC
GTCTTTGGCC TCACAGCGGG CCCCGGGCCC CATCCGACCA CGCGCGCGTT GTTGATCGAC
GCGGCGCGCA AGATCGGTCC ATGGGCGATT TCCTTTGCCG TCATCATGCG GCTGGGGCGC
GATGCTTCCC CCGGCTTTGT CCTGGCGTTG GTGTTGGCCT ACGCCATCGT ATGGGGCGCG
ATCATCACGG CGGGCGTGGC GATGCTGTTC TCGCTGTTTT CCGGCAGCGC GCACCGGCGC
GTGGCGGTCG AATATCTGTT CAAGCACGGC ATGTGGCCGA TCTTTCTGAC GGCCAGCCTG
GGCGCCTGCG GCGATGCACT GGTCGACCCG CGCGTGGCGT TGGTGCTGGG CGGCTCGCTC
TGTCTGCTGC TGGCCACGGT GTGCAACGTG GTGGCGTCAT TGATGCTGGC GGTAGGGGCG
CTGTGGGCGC GCCGGCCCAT CGGTCAGTTG ATCGCCAATC GCCCGCTGGA ACTGCGCAGC
GGCGAGCACA CGGGCAACCA GGTTCGCCGC CTGCTGGCCG CGTTCTGGCC GGTGCCGGTG
CTGGTGCTGG CCGGCACCAC CGTCACCGCC ACGCTGACGA CGCCCGACAA CGTTGACGTG
GTGGCGCGCC GCGCCGTGAT GACGTCGCTG CTGCTGGTGG CCGCCTTCTT CCTGTCGGCG
CTGGTCCGCC CGCGCGCGAA TTGGCGCGCG CACCTGCGTC TGACGCGCAG TTCGCCTTAT
CTCGAGCGGC TCAAGCATTT TGTCGGCGCG CTGATCAAGC TCGTCATCTG GATCGCCTTT
CTTGAACTGG TGTTGCGCGT GTGGGGCCAC ACGCTGGTGG AGGTCGCGCA CAGTTCGGTC
AATGGCAAGC GCATCGCCGA TGCCTTGGTG GGCCTGATCG GCACCGTGTT TGCCACCTGG
CTCGTCTGGA TCCTGCTCGA CACGGCGATC CTGCGGGCGC TGTCGCCGGC ATCCGCACGG
GCGCAGCCCA GCACGCGTGC ACTGACCATC CTTCCGCTGC TGCGCAATGG CCTGAAGGTG
ACGCTGGTGG TGACGGCCAG CATCGGCGTA CTGGCCAATC TGGGCGTCAA CGTGACGCCG
CTGGTGGCCG GCGCCGGCGT GATCGGCCTG GCGGTGGGGT TTGGGGCGCA GTCGCTGGCG
CAGGACTTCA TCACGGGCAT CTTCATCCTA ATGGAAGACA CGATCAGCGT GGGCGATGTG
GTGGACGTCG GGGTGGCCAC GGGCTCCGTC ATCAACCTGA CCATCCGCAC GGTGCGGCTG
CGCGATGGCA CGGGTGCGGT GCTGTCGATT CCGTTCAGCC AGATCAAGAC CGTGCGCAAT
CTCTCGCGCG ATTACTCGTT TGCCGACTTT GAAGTGCGCG TGGCGATGGA GGCCGAACCG
CAGCAGGCGA TCGATCTTGT GCGCGCGGCG GCTGACCAGA TTGCGGGTGA GCCGCGCTTT
GCCTATACGT TGTTCGGCGG TGCAGAAATC TTCGGGCTGG ACCGTTTCGA AGGTGGCGCG
ATGATCGTCA AGGGGCGGTT CAAGACGCGC CCGCAGAAGC AGGCGGATGT GCTGCGGGCG
TTCAACGTTG TGCTCAAGGA TGCGTTCGAC AAGGCGCACG TGCCGCTGGC GGCGCCGGGG
ACGGTGTTGC GGACTTCGGC GGCGTTGGAG GAGTGGATGG CGCGGGTGGC GCCGGAGAAA
GAGGCATCGG CTTCTTCCAA TGAGCCACCT GCTGCTGCGC CGGCGTAA
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| Protein sequence | MRTHFLFWTR RLWPLASFLL LLMAGVANVA DAAPVSFAKL AGLPTSTTSA SAPAADPAQT
RQSLDTVITL LNNDQQRTAL VNELKQLRDG MSAQQKVQAE QAPGLLGAVA SLIENGSLQA
DVEAGAPRYW LRRIEAASGN ASLLVAPDKR MPLVADFAST VGIWAAIAAG LLGLGWLIRR
VFGLTAGPGP HPTTRALLID AARKIGPWAI SFAVIMRLGR DASPGFVLAL VLAYAIVWGA
IITAGVAMLF SLFSGSAHRR VAVEYLFKHG MWPIFLTASL GACGDALVDP RVALVLGGSL
CLLLATVCNV VASLMLAVGA LWARRPIGQL IANRPLELRS GEHTGNQVRR LLAAFWPVPV
LVLAGTTVTA TLTTPDNVDV VARRAVMTSL LLVAAFFLSA LVRPRANWRA HLRLTRSSPY
LERLKHFVGA LIKLVIWIAF LELVLRVWGH TLVEVAHSSV NGKRIADALV GLIGTVFATW
LVWILLDTAI LRALSPASAR AQPSTRALTI LPLLRNGLKV TLVVTASIGV LANLGVNVTP
LVAGAGVIGL AVGFGAQSLA QDFITGIFIL MEDTISVGDV VDVGVATGSV INLTIRTVRL
RDGTGAVLSI PFSQIKTVRN LSRDYSFADF EVRVAMEAEP QQAIDLVRAA ADQIAGEPRF
AYTLFGGAEI FGLDRFEGGA MIVKGRFKTR PQKQADVLRA FNVVLKDAFD KAHVPLAAPG
TVLRTSAALE EWMARVAPEK EASASSNEPP AAAPA
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