| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3000 |
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| Symbol | |
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| ID | 8020682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3165211 |
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| End bp | 3166257 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831796 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002982941 |
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| Protein GI | 241664581 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTT CGATCCGTTC CATTCCGCTG TCGGCCGTTG CACTGTCGGC GCTGCTGGCC
TGCGGCGCCG CGCGTGCCCA ATCGAGCGTC ACGCTGTACG GCGTGATGGA AACCGGCCTG
CGCTATAGCA CCAACAACGA CGCCGACGGC CACGGCAAGG CCGAGATGGC GGGCGGCTAC
TACAGCGGCA GCCGCTTCGG CATTCGCGGG TCGGAAGACC TGGGCAACGG GCTGAAGGCC
GTGTTCCACC TGGTCAGCGG TTTCGCGCCG GACACGGGCG TGGGGTCCAC CAACGACATG
GGCCTGGGCG GCTACAAACC GACCACGCCT GCCACCTCGC GCCTGTTCGG GCGCCAGGCG
TACGTCGGCT TGGAAGGCGG GTTCGGCTCG CTGACGTTCG GCCGGCAGGA GAACCTCGTC
TTCAACACGG CCGGGCAGTA CGACGCGCTT TCGATCGGCA ACCTCGGCGC AACCGCCTGG
CACGTGACGG CCACCGGCGT GCGCATCGAC AACTCGGTCA AGTACGTGGG CGATTTCAAC
GGCTGGCACC CCGGCGTGAT GGTCGGCATG GGCGAGCAGG CAGGGGCGTT CTCGGCGGGC
AACTACAGCG CGCTGTCGCT CAACTACGCC AGCGGCCCGT TCGCGTTCGG CGGCGCGTGG
GAGCAGCAGA AAGACCTGCA ATCGGTTGGC ACCCGCACGT GGACGACCGG CGGCAGCGTG
CAGGTCGGCC CCGCCAAACT GATGCTCGGC TACATCAACT ACCGCGACGG CACGCCCACC
AAGAACGACC TCATCCTCGG CGGCGTGAAA TACGACTTCA GCGGCCAGTA CAACCTAGTG
GTGGGCGGTA TGGCCACGCG CCAGCGCGAC CCCGACGGCC TGCGCTACAC GGCCTACGCG
ATCATGAATT ACGTGGTCAG CAAGCGCACG TGGCTGTACG TCGGCATGGA CTACACCCAT
CAGAAAGACG CCGGCACCGT CCTTGCAGCC GCACTGCCGA AAGCCTCGCA GACCGGCGTC
ATGATCGGCA TGCGCCACGG CTTCTAA
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| Protein sequence | MTISIRSIPL SAVALSALLA CGAARAQSSV TLYGVMETGL RYSTNNDADG HGKAEMAGGY
YSGSRFGIRG SEDLGNGLKA VFHLVSGFAP DTGVGSTNDM GLGGYKPTTP ATSRLFGRQA
YVGLEGGFGS LTFGRQENLV FNTAGQYDAL SIGNLGATAW HVTATGVRID NSVKYVGDFN
GWHPGVMVGM GEQAGAFSAG NYSALSLNYA SGPFAFGGAW EQQKDLQSVG TRTWTTGGSV
QVGPAKLMLG YINYRDGTPT KNDLILGGVK YDFSGQYNLV VGGMATRQRD PDGLRYTAYA
IMNYVVSKRT WLYVGMDYTH QKDAGTVLAA ALPKASQTGV MIGMRHGF
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