| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2990 |
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| Symbol | mdoD |
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| ID | 8020672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3153465 |
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| End bp | 3155147 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644831787 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_002982932 |
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| Protein GI | 241664572 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCTG GACGTGGGTT GTGCGAAGAT GAATCACCCC TGGCTCATCC CCTGGTCCTG
CCCCGATCCA TGCACCGTCG CGACCTGCTC AAGCAGTTGG CCGCCGGGCT GCTTGCCCTG
GCTCCTGGTT TGTCCCGCAG CGCCACGCCC GGCACCGCCG CTGGCGCCCC CGAACCGTTT
GACGAAGCCC GCCTGCTGGC GCGCGCTCGG ACCTTGGCGG CACGGCCGTA TCGGCCGCGC
AGCACGCAGT TGCCTGCGCC GCTGGCTGCA CTGAACTGGG ACGGCTATCA ATCGATTGGC
TATCGCCCCG ATCACGCCCT GTGGGCAGGG CAGCACTTGC CGTTCGAGGC CAGGTTCTTC
CACCTCGGGC TGTTCTTCAA GTCGGCCGTG CAGATGCACG AGGTGGTGGA CGGCCAGGCT
CGCCTGATCG CCTACGACCC TGCCATGTTC GATTACGGCC GGAGCGGACT GGCCCGCCAG
GCGCTGCCGG CCGATCTTGG TTTCGCCGGT TTCCGGCTGA CGACCAAGGC GGACCCGACG
CGCGATGTGG CGGCCTTCCT GGGTGCCAGC TACTTTCGCG CCGTCGGCGG GCAGTGGCAA
TACGGCATGT CGGCGCGCGG CCTGGCGATT GATACGGGGT TGCCTCGCGC AGAAGAGTTT
CCGGACTTCA CTGAATTCTG GCTGGTGCGC CCGGCCGCCG ATGCCGATAC GGCGCGCGTC
TATGCGCTGC TCGATTCTCC GAGCGTGGCC GGCATCTACC GCTTCGACAT CCGCCCCGGC
GACGCGCTCG TGATGGACGT GGCCGCCACG CTCTACGTGC GCAAGCCGAT CGAGCGTCTG
GGCATCGCCC CGCTGACCAG CATGTTCCTC TACGGCGAGA ACGACCGCAC CGACCGCGCC
GGCGATCGCC ACAGCGCTGC ACGTCGCTGG CGCGCATCGG ACTGGCGCCC GGAAATCCAT
GATTCCGATG GCCTGGCCAT CTGGCGTGGC TCGGGCGAGT GGATCTGGCG GCCGCTGGCC
AATCCGCCCG TGCTGCGCAG CCAGCGCTTT GCCGACGACA GCCCGCGCGG CTTCGGCCTG
CTGCAGCGTG ACCGCAATTC CGATCACTAC CAGGATGACG GCGTGTTCTA CGAGAAGCGC
CCGAGCGTGT GGGTCGAGCC CACGCACGAC TGGGGTGAAG GCGCGGTGGA ACTGGTGGAG
CTGTCGGCCA ACGATGAAAC ATTCGACAAC ATCGTCGCGT TCTGGCGGCC GGCTGTTGCG
CCGCATGCCG GGCAGGAGCT GGCGTTCGGC TATCGGCTGA CGTGGGGCGC GCAACCCGCG
GCGGCCTCCC CGCTGGCGCG GGTGGTGGCG ACGCGCACGG GCATTGGCGG CGTGGTGGGA
CAGCCGCGCA AATACTTCTC GTGGCGCTTC GTGGTGGACT TTGCCGGCGG CGAGCTGTCT
CGGCTGGGGC GCAGCACGGC GGGGTCGACT GTGGAGCCTG TCATACGCGC CTCGCGCGGG
CGGGTGGAGA TTGCGTCGGC GCGGCCGCTG GCGAGCATCG ATGGCGTCCG GGCGATGTTT
GATGTGGTGC CGGATGCGAG CAATGCGCCG ATTGAGTTGT TGCTGACGTT GCAGTCGGGG
GAGCGGTTGC TTTCTGAGAC TTGGGCGTAT CAGTGGACGC CGCCGGTGGA TCGGGGCGTG
TGA
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| Protein sequence | MLPGRGLCED ESPLAHPLVL PRSMHRRDLL KQLAAGLLAL APGLSRSATP GTAAGAPEPF
DEARLLARAR TLAARPYRPR STQLPAPLAA LNWDGYQSIG YRPDHALWAG QHLPFEARFF
HLGLFFKSAV QMHEVVDGQA RLIAYDPAMF DYGRSGLARQ ALPADLGFAG FRLTTKADPT
RDVAAFLGAS YFRAVGGQWQ YGMSARGLAI DTGLPRAEEF PDFTEFWLVR PAADADTARV
YALLDSPSVA GIYRFDIRPG DALVMDVAAT LYVRKPIERL GIAPLTSMFL YGENDRTDRA
GDRHSAARRW RASDWRPEIH DSDGLAIWRG SGEWIWRPLA NPPVLRSQRF ADDSPRGFGL
LQRDRNSDHY QDDGVFYEKR PSVWVEPTHD WGEGAVELVE LSANDETFDN IVAFWRPAVA
PHAGQELAFG YRLTWGAQPA AASPLARVVA TRTGIGGVVG QPRKYFSWRF VVDFAGGELS
RLGRSTAGST VEPVIRASRG RVEIASARPL ASIDGVRAMF DVVPDASNAP IELLLTLQSG
ERLLSETWAY QWTPPVDRGV
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