Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2989 |
Symbol | |
ID | 8020671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3152430 |
End bp | 3153179 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644831786 |
Product | protein of unknown function DUF1415 |
Protein accession | YP_002982931 |
Protein GI | 241664571 |
COG category | [S] Function unknown |
COG ID | [COG3310] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.931088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCTCGG CGCACATCAA CGGCGCGCGC CGGACGTTGC AAATCACAAC GTCTACACCG TCGCAAGAAA CGCTCCCGAC CCATCGACTA CACTGCCCGC TGTCTCTTCC CTGCCCGCAC GCCGTGTCTG ACCACGCCCC CGATTTCGTC CTGCTGGATC CCCCCGCCGA TGCCGTCAAC TTGGACGCAA ACGCCGCCGC CCTTCATGTC TCGACGGTAC AGCGCTGGTT GGAAGACGCC GTCATTGGTC TGAACCTCTG CCCCTTCGCC AAGGCCGTCC ACGTCAAGCG GCAGGTTCGA TACGTCGTCA GCCGCGCCAC GATGGACGGC GACGTGCTCG ACCACCTGCG TGCCGAAGCG GACCTGCTGC ACGCCACCCC CGCCGCACAG ATCGACACCA CGTTGCTGAT CGTCCCCGCC CTTGCCGACT TCCTCGATTT CCATTCGCTC ACGGAGCGGG CTGAATCCGT GCTCGCCAAG GCCGGCTACG AAGGCGAACT GCAACTGGCC AGCTTCCACC CCGAATTCGT CTTCGCCGAC GCAGAGCCTG ACGACATCGC CAACGCCACC AACCGCGCGC CCCTCCCCAT CCTGCATCTG CTGCGCGAAG ACAGCATCGC CCGCGCCGCC GCAGCCGTGC CCGACGCAGC GGACATCTAC GAACGCAATA TCGCGACGAT GGAAAAGCTG GGCCCCGAAG GCTGGGCAGA AATGGCAAAG AAGTTCGGCA AGATACCGCC CCGCGACTAA
|
Protein sequence | MISAHINGAR RTLQITTSTP SQETLPTHRL HCPLSLPCPH AVSDHAPDFV LLDPPADAVN LDANAAALHV STVQRWLEDA VIGLNLCPFA KAVHVKRQVR YVVSRATMDG DVLDHLRAEA DLLHATPAAQ IDTTLLIVPA LADFLDFHSL TERAESVLAK AGYEGELQLA SFHPEFVFAD AEPDDIANAT NRAPLPILHL LREDSIARAA AAVPDAADIY ERNIATMEKL GPEGWAEMAK KFGKIPPRD
|
| |