Gene Rpic12D_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2989 
Symbol 
ID8020671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3152430 
End bp3153179 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID644831786 
Productprotein of unknown function DUF1415 
Protein accessionYP_002982931 
Protein GI241664571 
COG category[S] Function unknown 
COG ID[COG3310] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.931088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCGG CGCACATCAA CGGCGCGCGC CGGACGTTGC AAATCACAAC GTCTACACCG 
TCGCAAGAAA CGCTCCCGAC CCATCGACTA CACTGCCCGC TGTCTCTTCC CTGCCCGCAC
GCCGTGTCTG ACCACGCCCC CGATTTCGTC CTGCTGGATC CCCCCGCCGA TGCCGTCAAC
TTGGACGCAA ACGCCGCCGC CCTTCATGTC TCGACGGTAC AGCGCTGGTT GGAAGACGCC
GTCATTGGTC TGAACCTCTG CCCCTTCGCC AAGGCCGTCC ACGTCAAGCG GCAGGTTCGA
TACGTCGTCA GCCGCGCCAC GATGGACGGC GACGTGCTCG ACCACCTGCG TGCCGAAGCG
GACCTGCTGC ACGCCACCCC CGCCGCACAG ATCGACACCA CGTTGCTGAT CGTCCCCGCC
CTTGCCGACT TCCTCGATTT CCATTCGCTC ACGGAGCGGG CTGAATCCGT GCTCGCCAAG
GCCGGCTACG AAGGCGAACT GCAACTGGCC AGCTTCCACC CCGAATTCGT CTTCGCCGAC
GCAGAGCCTG ACGACATCGC CAACGCCACC AACCGCGCGC CCCTCCCCAT CCTGCATCTG
CTGCGCGAAG ACAGCATCGC CCGCGCCGCC GCAGCCGTGC CCGACGCAGC GGACATCTAC
GAACGCAATA TCGCGACGAT GGAAAAGCTG GGCCCCGAAG GCTGGGCAGA AATGGCAAAG
AAGTTCGGCA AGATACCGCC CCGCGACTAA
 
Protein sequence
MISAHINGAR RTLQITTSTP SQETLPTHRL HCPLSLPCPH AVSDHAPDFV LLDPPADAVN 
LDANAAALHV STVQRWLEDA VIGLNLCPFA KAVHVKRQVR YVVSRATMDG DVLDHLRAEA
DLLHATPAAQ IDTTLLIVPA LADFLDFHSL TERAESVLAK AGYEGELQLA SFHPEFVFAD
AEPDDIANAT NRAPLPILHL LREDSIARAA AAVPDAADIY ERNIATMEKL GPEGWAEMAK
KFGKIPPRD