Gene Rpic12D_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2982 
Symbol 
ID8020664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3145306 
End bp3146403 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content65% 
IMG OID644831779 
ProductABC transporter related 
Protein accessionYP_002982924 
Protein GI241664564 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TTGAATTCCG CAACCTGGGG CACAGCTACC GCCCCGATCC GCAAAACCTG 
AGCGACTACG CGCTGCAGCC CATGAACATG ACCTGGCGCG ACGGCGGTGC GTATGCCCTG
CTCGGTCCGT CGGGCTGCGG CAAGTCCACG CTGCTGAACA TCATCTCGGG GCTGCTGACG
CCGTCCGAAG GGCAGGTGCT GTTTGACGAC CGTGACGTCA CGCACGCCAG CCCGCGCGAG
CGCAACATCG CGCAGGTGTT CCAGTTCCCG GTCATCTACG ACACGATGAC CGTGTTCGAC
AACCTCGCCT TCCCGCTGCG CAACCGCAAG ACGCCGGAAG CCGAAGTGAA GAAGCGCGTG
GAGGAAGTGG CCGAGATCCT CGAGCTGCAG CACGCGCTCA AGCGCCGCGC CTCAGGCCTG
GCGGCCGACG CCAAGCAGAA GATCTCGCTG GGCCGCGGCC TGGTGCGCAA GGACGTGGCG
GCCATCCTGT TCGACGAGCC GCTCACCGTC ATCGATCCGC ACCTGAAGTG GCAACTGCGT
CGCCAGCTCA AGAAGATTCA CCAGCAGCTC AAGCTCACGC TGATCTACGT GACGCACGAC
CAGGTGGAAG CGCTGACCTT TGCCGACGAG GTGGTCGTCA TGACCGAAGG CAAGGTCGTG
CAGCAAGGTG GGCCGGAAGC GCTGTTCGAG CGGCCGGACC ACACCTTCGT CGGCTACTTC
ATCGGTAGCC CGGGCATGAA CCTCTACCCG GTGACGGTGG ATGGCGATGT GATTGCGCTG
GGCGGTCAGC GCCTGTCGGT GGGGCGGGAC ACGCTCGCCA CGCTCAAGAA CGCAAACGGT
TCGCTCAAGC TCGGCATTCG CCCGGAATTC GTGCAACTGG CCGCACCCGG CGAAGTCGGC
ACCGTCGCCG CCAGCGTCCA TCAGGTGCAG CAACTGGGTA CGCACCAGTT GCTGATCGCC
AGCCTCGGTG AAGGCGGCGG ACTGCCGATC AAGGCCAAGC TGCCCAACGA AGTGTCCGTG
ACCGAATCGC GCGTGTGGCT GCGCCTGGAT GCGCCGCAGA CGCTGTACTA CAGCAATGAC
GAGAGGATCG GCCGATGA
 
Protein sequence
MARIEFRNLG HSYRPDPQNL SDYALQPMNM TWRDGGAYAL LGPSGCGKST LLNIISGLLT 
PSEGQVLFDD RDVTHASPRE RNIAQVFQFP VIYDTMTVFD NLAFPLRNRK TPEAEVKKRV
EEVAEILELQ HALKRRASGL AADAKQKISL GRGLVRKDVA AILFDEPLTV IDPHLKWQLR
RQLKKIHQQL KLTLIYVTHD QVEALTFADE VVVMTEGKVV QQGGPEALFE RPDHTFVGYF
IGSPGMNLYP VTVDGDVIAL GGQRLSVGRD TLATLKNANG SLKLGIRPEF VQLAAPGEVG
TVAASVHQVQ QLGTHQLLIA SLGEGGGLPI KAKLPNEVSV TESRVWLRLD APQTLYYSND
ERIGR