Gene Rpic12D_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2975 
Symbol 
ID8020651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3132525 
End bp3134054 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content64% 
IMG OID644831766 
Producttransposase IS66 
Protein accessionYP_002982917 
Protein GI241664557 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAC CCACCAACCT CGATGCCCTG AGCCCGGACG AACTGCGCAC ACTGGCTGCG 
CAGTTGATGG CCCAGGTCGG CGAGAAGGAC CGGGAGTTGC GGTACCGGCA AGCCAAGATC
GACCAGCTCA CACACGAGCT GGCCATCCAC AAGCGCTGGA AGTTCGGCAA GCGCAGCGAG
CAACTGACAT CTGAACAGGC GAGTCTGCTG GACGAAGCCA TTGACGCAGA CCTCGAGGCG
ATTGAGACCG AACTGGAAGC GCTCCTGCCG TCGTCCAAAT CTGAAGCCAA GAGCAAGCCC
AAGCGCCAGG CATTGCCGCC GCAGTTGCCG CGCACCGACA TCCACCACGA GCCGGACGCA
GAGACCTGCA CCTGTGGGTG TGCGCTCAAG CGCATTGGCG AAGACATCAG CGAGAAGCTG
GACTACACGC CGGGCACGTT CACCGTGGAG CGTCACATCC GCGGCAAATG GGTGTGCGAT
CAGTGTGAGA CGCTGGTGCA GACGCCGGTG CCACCCCACG TCATCGACAA AGGCATCCCG
ACGGCCGGAC TGCTGGCACA TACGCTGGTG TCCAAGTTCG GCGACCACCT TCCCCTGTAT
CGGCAGGAGC GCATCTATGC GCGCGCCGGT CTGGCCATCC CGCAATCGAC ACTGGGCGCG
TGGGTGGGCA TCTGTGGCGT GCGTCTGCAA CCGCTGGTGG ACGCCCTGCA AGAAGAGGTT
CTGAGCCACG GTGTTCTGCA CGCCGACGAA ACGCCAGTGC AGATGCTCGC GCCCGGCAAT
GGCAAGACGC ACCGCGCCTA CCTGTGGGCC TATGCGCCGA GCGAGTTCGA GAAGATGCGC
GCGGTGATTT ACCAGTTTGC GCCCAGCCGC AGCGGCGAGC ACGCTCGCGC GTTCCTGGGG
CAGTGGCAAG GCAAGCTGGT ATGTGATGAC TTCGCCGGCT ACAAGGCCAG CTTCGACGGT
GGCGTCACTG AGATCGGTTG CATGGCCCAT TCGCGGCGCA AGTTCTTTGA ACTGCACGAC
AAGCACAAGA GCGAATTGGC GGGCCAGGCA CTGCGCTACA TGGTGAGCTT GTACGAGATC
GAGGCGCAAG TGCGGGATGC TGAGCCAGAC CAGCGCCTGG CAGCGCGGCA ACAAAGGGCT
GGCCCGATTC TAGAGCGGCT GCACGCCTGG CTCGAGGAAC AGCGACGCCG CGTCCCAGAC
GGCTCGGCGA TCGCGCGGGC CATTGACTAC AGCCTCAAGC GGTGGCCGGC TCTCGTGCGT
TACCTCGACG ACCCGACGGT GCCCATCGAC AACAACCACG TCGAGCGACA GATCCGGCCG
GTTGCCCTGG GTCGCTCCAA TTGGTTGTTT GCAGGCTCAC TGCGCGCCGG TCAACGCGCG
GCTGCCGTCA TGAGCCTGAT CCAATCGGCC AAGCTCAACG GGCACGATCC CTACGCCTAT
CTGAAAGACG TCCTCACGCG ACTGCCGACC CACAAGGCGG CCGACATCGC CGAACTGCTC
CCGCATCGCT GGACGCCCAG CGCCACCTAG
 
Protein sequence
MNLPTNLDAL SPDELRTLAA QLMAQVGEKD RELRYRQAKI DQLTHELAIH KRWKFGKRSE 
QLTSEQASLL DEAIDADLEA IETELEALLP SSKSEAKSKP KRQALPPQLP RTDIHHEPDA
ETCTCGCALK RIGEDISEKL DYTPGTFTVE RHIRGKWVCD QCETLVQTPV PPHVIDKGIP
TAGLLAHTLV SKFGDHLPLY RQERIYARAG LAIPQSTLGA WVGICGVRLQ PLVDALQEEV
LSHGVLHADE TPVQMLAPGN GKTHRAYLWA YAPSEFEKMR AVIYQFAPSR SGEHARAFLG
QWQGKLVCDD FAGYKASFDG GVTEIGCMAH SRRKFFELHD KHKSELAGQA LRYMVSLYEI
EAQVRDAEPD QRLAARQQRA GPILERLHAW LEEQRRRVPD GSAIARAIDY SLKRWPALVR
YLDDPTVPID NNHVERQIRP VALGRSNWLF AGSLRAGQRA AAVMSLIQSA KLNGHDPYAY
LKDVLTRLPT HKAADIAELL PHRWTPSAT