Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2975 |
Symbol | |
ID | 8020651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3132525 |
End bp | 3134054 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644831766 |
Product | transposase IS66 |
Protein accession | YP_002982917 |
Protein GI | 241664557 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTAC CCACCAACCT CGATGCCCTG AGCCCGGACG AACTGCGCAC ACTGGCTGCG CAGTTGATGG CCCAGGTCGG CGAGAAGGAC CGGGAGTTGC GGTACCGGCA AGCCAAGATC GACCAGCTCA CACACGAGCT GGCCATCCAC AAGCGCTGGA AGTTCGGCAA GCGCAGCGAG CAACTGACAT CTGAACAGGC GAGTCTGCTG GACGAAGCCA TTGACGCAGA CCTCGAGGCG ATTGAGACCG AACTGGAAGC GCTCCTGCCG TCGTCCAAAT CTGAAGCCAA GAGCAAGCCC AAGCGCCAGG CATTGCCGCC GCAGTTGCCG CGCACCGACA TCCACCACGA GCCGGACGCA GAGACCTGCA CCTGTGGGTG TGCGCTCAAG CGCATTGGCG AAGACATCAG CGAGAAGCTG GACTACACGC CGGGCACGTT CACCGTGGAG CGTCACATCC GCGGCAAATG GGTGTGCGAT CAGTGTGAGA CGCTGGTGCA GACGCCGGTG CCACCCCACG TCATCGACAA AGGCATCCCG ACGGCCGGAC TGCTGGCACA TACGCTGGTG TCCAAGTTCG GCGACCACCT TCCCCTGTAT CGGCAGGAGC GCATCTATGC GCGCGCCGGT CTGGCCATCC CGCAATCGAC ACTGGGCGCG TGGGTGGGCA TCTGTGGCGT GCGTCTGCAA CCGCTGGTGG ACGCCCTGCA AGAAGAGGTT CTGAGCCACG GTGTTCTGCA CGCCGACGAA ACGCCAGTGC AGATGCTCGC GCCCGGCAAT GGCAAGACGC ACCGCGCCTA CCTGTGGGCC TATGCGCCGA GCGAGTTCGA GAAGATGCGC GCGGTGATTT ACCAGTTTGC GCCCAGCCGC AGCGGCGAGC ACGCTCGCGC GTTCCTGGGG CAGTGGCAAG GCAAGCTGGT ATGTGATGAC TTCGCCGGCT ACAAGGCCAG CTTCGACGGT GGCGTCACTG AGATCGGTTG CATGGCCCAT TCGCGGCGCA AGTTCTTTGA ACTGCACGAC AAGCACAAGA GCGAATTGGC GGGCCAGGCA CTGCGCTACA TGGTGAGCTT GTACGAGATC GAGGCGCAAG TGCGGGATGC TGAGCCAGAC CAGCGCCTGG CAGCGCGGCA ACAAAGGGCT GGCCCGATTC TAGAGCGGCT GCACGCCTGG CTCGAGGAAC AGCGACGCCG CGTCCCAGAC GGCTCGGCGA TCGCGCGGGC CATTGACTAC AGCCTCAAGC GGTGGCCGGC TCTCGTGCGT TACCTCGACG ACCCGACGGT GCCCATCGAC AACAACCACG TCGAGCGACA GATCCGGCCG GTTGCCCTGG GTCGCTCCAA TTGGTTGTTT GCAGGCTCAC TGCGCGCCGG TCAACGCGCG GCTGCCGTCA TGAGCCTGAT CCAATCGGCC AAGCTCAACG GGCACGATCC CTACGCCTAT CTGAAAGACG TCCTCACGCG ACTGCCGACC CACAAGGCGG CCGACATCGC CGAACTGCTC CCGCATCGCT GGACGCCCAG CGCCACCTAG
|
Protein sequence | MNLPTNLDAL SPDELRTLAA QLMAQVGEKD RELRYRQAKI DQLTHELAIH KRWKFGKRSE QLTSEQASLL DEAIDADLEA IETELEALLP SSKSEAKSKP KRQALPPQLP RTDIHHEPDA ETCTCGCALK RIGEDISEKL DYTPGTFTVE RHIRGKWVCD QCETLVQTPV PPHVIDKGIP TAGLLAHTLV SKFGDHLPLY RQERIYARAG LAIPQSTLGA WVGICGVRLQ PLVDALQEEV LSHGVLHADE TPVQMLAPGN GKTHRAYLWA YAPSEFEKMR AVIYQFAPSR SGEHARAFLG QWQGKLVCDD FAGYKASFDG GVTEIGCMAH SRRKFFELHD KHKSELAGQA LRYMVSLYEI EAQVRDAEPD QRLAARQQRA GPILERLHAW LEEQRRRVPD GSAIARAIDY SLKRWPALVR YLDDPTVPID NNHVERQIRP VALGRSNWLF AGSLRAGQRA AAVMSLIQSA KLNGHDPYAY LKDVLTRLPT HKAADIAELL PHRWTPSAT
|
| |