| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2961 |
|---|
| Symbol | |
|---|
| ID | 8020633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3107688 |
|---|
| End bp | 3108491 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644831748 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_002982903 |
|---|
| Protein GI | 241664543 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4676] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0147846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGTG GGATGACGCG CTTGGCGCTG GGCACCGTCG CGCTGCTGCT GGCCGCTTCG
GCGCTGGCTG AGCCGGTGGC CGATCTGGAA GGGCCTATCG GCGGCTGGCG CAACAGCAAG
CTGACCAACG AGCTGGAACA GTACACCGCG GCGTATCCGA ACCCCCCCGT GGACCGTGGC
GCGCAAAAGT ACCGCACGCT CATCGCCGGG CGCATCCGCG CGGCGGGCAA GCAGCGCCGC
CCGCCGGTGC TCGTCGTCAA CGGCAACGCC ATGCCGCTGT ATGGCGATGG CGAAGGCCGT
TTTGCGCGCC CCTGGGCGTT CGGCCCCGGC TCGAACAGCG TCGAAATCGT CAGTGCCGAC
GGGCAGTCAC GCCAACGCCT GCAGTTCTAC GAGGCCGACA CCACCAAGAC ATCGGCCAAG
CTGCGCGCCG TCCTCACGTG GGACGACCCG CGCGCCGAGG TCGACATGCA CGTCATTTCG
CCGATTGGCG ACCACGCGTT CTGGGCGCAG CCGCTGCTGT CCGACGGCGG CGGCCTCGAC
GTGGACAGCG TCGACGGTGC CGGGCCGGAG ATTTTCTCGA CCGCCGCGCC ACGCCCGGGC
GTGTGGCTGT TCTACGTGAA CTATTGGGGC AACTTCAACG CCGGCGGCTA CAACTTCGAC
GAAAAGGCAC ATGACCGGGA TCTCATCACC GCACAATTGA CGCTGATCTA TAACGAGAAC
ACGCCCAACG AGCGGCGCGA GTTCGTCAGT GTGCCGCTGC GCAAGATCGG CGAGCTGGCG
CTGATGAAAT CGATCCGCTT CTGA
|
|---|
| Protein sequence | MKSGMTRLAL GTVALLLAAS ALAEPVADLE GPIGGWRNSK LTNELEQYTA AYPNPPVDRG
AQKYRTLIAG RIRAAGKQRR PPVLVVNGNA MPLYGDGEGR FARPWAFGPG SNSVEIVSAD
GQSRQRLQFY EADTTKTSAK LRAVLTWDDP RAEVDMHVIS PIGDHAFWAQ PLLSDGGGLD
VDSVDGAGPE IFSTAAPRPG VWLFYVNYWG NFNAGGYNFD EKAHDRDLIT AQLTLIYNEN
TPNERREFVS VPLRKIGELA LMKSIRF
|
|---|
| |