| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2956 |
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| Symbol | |
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| ID | 8020628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3101938 |
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| End bp | 3103197 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644831743 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002982898 |
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| Protein GI | 241664538 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.127266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000719262 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTACCG AAGCTCCTGC CATCGCCGAT CCCAACCCGC CCGCCGCCGA CCGGCTCCCC
CTGGGCGCCA CGCCGCTGTT TGCCGTCGCC GTCGGGCTTA TCGTCATCAA CCTGTTCGGC
ATCCAGCCGC TCATTGCCGA GATCGCCGCG AGCATTGGCT GGACCACCGC CGCCGCTGGC
TTGCTCGTCA CCGCCACGCT CATCGGCTAT GGCATCGGTC TGTTGCTGCT GATGCCGTTG
ACCGACCTGC AGGACAACCG CGCGCTGGCC TCGCGCACGC TGTGGGGCGC GGTGGCTTCG
CTGGCGCTGA CCACCGTCGC GCACAGCGGC CAGGTACTGA TGCTCGCCGC CTTCGCCATC
GGCCTGACGT CGACTGTCAT TCAGATGCTG ATTGCACTGG CGGGGCGCTT GGCCGCCGAC
CAGCGGCGCG GGCGCGTGCT GGGCGACATC ATGATCGGCC TGAACCTGGG CATCCTGCTC
TCCCGCCCGG CCGCCAGCTT CATCGCAGCG CAGTGGGGGT GGCGGGCGTT TTACGGTGCT
TCTGGGGTGG CGATTGCCGT GCTGGCCGTC CTGCTGCCGC GCGTGATGCC GACCTTCGTG
CCGCCGCGCA CGTTGTCATA CGGCGCGCTG CTGGGCTCGT ACGGCAACCT GCTGCGCAGA
GAGCCGGTGT TGCGTCGCCG TGCCGCTACG CAGGCCTTGC TGATGGCGGC GTTCACGCTG
TTCTGGACGG CTGTGGCGCT GCGGTTGGTG GCAGCGCCGT TCCATCTTTC GCAAAATGGC
ATCGGGATCT TCGCGCTGTG CGGTGCGGCC GGTGTCGTGG CCGCGCCGAT TGCCGGGCGG
CTGGCGGATC GCGGTCTCGT GCGCGTGGGT ACGCTGCTCG CGCACGGCTG CGCGGCAACG
GGTTTGCTCG TGGCGCTTGC TTCGGCGCTG CTGCCGGGCC TGAGCGTTCC CGTCATGTTG
GCGATGCTCG TGGCTGCGGC GCTGTTGCTC GATTTCGGCG CCATCGGCGA CCAGGCGCTT
GGCCGCTACA TGGTCAACAC GCTGTCGACC GAGATCCGGG GGCGCGTGAA CGGTCTGTAC
ACCGGAGCGT TCTTCTTCGG CGCGGCAGCA GGCGGTGGAT TGGCCGGCGT GGCGTGGGCC
CGCGCCGGAT GGATCGGCGT ATCCGTTCTT GCGCTCGGGT TTGTGGCCGC GGCTGCACTT
GTCTTCGTAT GGCCAGCGCG TGCGCCGCGT GCCATTGGCG CCACACCGCG CCGTTGCTGA
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| Protein sequence | MTTEAPAIAD PNPPAADRLP LGATPLFAVA VGLIVINLFG IQPLIAEIAA SIGWTTAAAG
LLVTATLIGY GIGLLLLMPL TDLQDNRALA SRTLWGAVAS LALTTVAHSG QVLMLAAFAI
GLTSTVIQML IALAGRLAAD QRRGRVLGDI MIGLNLGILL SRPAASFIAA QWGWRAFYGA
SGVAIAVLAV LLPRVMPTFV PPRTLSYGAL LGSYGNLLRR EPVLRRRAAT QALLMAAFTL
FWTAVALRLV AAPFHLSQNG IGIFALCGAA GVVAAPIAGR LADRGLVRVG TLLAHGCAAT
GLLVALASAL LPGLSVPVML AMLVAAALLL DFGAIGDQAL GRYMVNTLST EIRGRVNGLY
TGAFFFGAAA GGGLAGVAWA RAGWIGVSVL ALGFVAAAAL VFVWPARAPR AIGATPRRC
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