Gene Rpic12D_2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2954 
Symbol 
ID8020626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3100606 
End bp3101076 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID644831741 
Product30S ribosomal protein S7 
Protein accessionYP_002982896 
Protein GI241664536 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0404513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000060996 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCACGTC GTCGTGAAGT CCCCAAGCGG GAAATTCTGC CGGACCCGAA GTTCGGCAAT 
GTGGAAGTCG CCAAGTTCAT GAACGTCCTG ATGCTGGACG GCAAGAAGTC GGTGGCTGAA
CGTATCGTCT ACGGTGCGTT CGACCAGATC GAAAAGAAAG CAGGCAAGGC GCCGATCGAG
GTGTTCACGC TGGCTATCGG CAACATCAAG CCGGTGGTCG AAGTGAAGAG CCGTCGTGTT
GGTGGCGCCA ACTATCAGGT GCCGGTCGAA GTCCGGCCGT CGCGTCGTCT GGCATTGGCG
ATGCGTTGGC TGCGGGAAGC TGCGAAGAAG CGCAGCGAGA AGTCGATGGC CCTGCGTCTG
GCTGGTGAGC TGCTCGAAGC CTCGGAAGGC CGCGGCGGCG CCATGAAGAA GCGCGACGAA
GTGCACCGCA TGGCTGAAGC CAACAAGGCG TTCTCGCACT TCCGCTTCTA A
 
Protein sequence
MPRRREVPKR EILPDPKFGN VEVAKFMNVL MLDGKKSVAE RIVYGAFDQI EKKAGKAPIE 
VFTLAIGNIK PVVEVKSRRV GGANYQVPVE VRPSRRLALA MRWLREAAKK RSEKSMALRL
AGELLEASEG RGGAMKKRDE VHRMAEANKA FSHFRF