Gene Rpic12D_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2945 
SymbolrplV 
ID8020617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3093302 
End bp3093631 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content59% 
IMG OID644831732 
Product50S ribosomal protein L22 
Protein accessionYP_002982887 
Protein GI241664527 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0396583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000112482 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAGTTA AAGCGATTCA TCGCGGCGCC CGTATCTCCG CACAGAAGAC GCGCCTGGTC 
GCTGACCAGA TTCGCGGCCT GTCGATCGAG CGCGCGCTCA ACGTGCTGAC GTTCAGCCCG
AAGAAGGCGG CTGGCATCGT GAAGAAGGTG GTTGAGTCCG CCATCGCGAA CGCCGAGCAC
AATGAAGGCG CCGATATCGA CGAGCTGAAG GTCAAGTCGA TCTACATCGA CAAGGCCACG
TCGCTCAAGC GTTTCACGGC GCGTGCGAAG GGCCGTGGCA ACCGCATCGA GAAACAAACC
TGTCACATCA CTGTGACGCT GGGCAACTAA
 
Protein sequence
MEVKAIHRGA RISAQKTRLV ADQIRGLSIE RALNVLTFSP KKAAGIVKKV VESAIANAEH 
NEGADIDELK VKSIYIDKAT SLKRFTARAK GRGNRIEKQT CHITVTLGN