| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2930 |
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| Symbol | secY |
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| ID | 8020602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3085854 |
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| End bp | 3087176 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644831717 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_002982872 |
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| Protein GI | 241664512 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000799077 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCAGG CCAAGAACAC GGCCAAGTAC GGCGATCTTC GCCGTCGGTT GGTGTTCCTG
GTTCTGGCAC TGCTGGTGTA CCGGATCGGC GCGCACATTC CTGTGCCCGG TATCGATCCG
GATCAACTGG CGCAGCTTTT CCAACGGCAG TCGGGTGGCA TCCTCGGGAT GTTCAACCTG
TTCTCCGGTG GTGCGCTGTC GCGTTTCACG GTGTTTGCGC TGGGGATCAT GCCGTACATC
TCGGCGTCGA TCATCATGCA ACTGCTGACG ATCGTGTTGC CGCAGCTGGA ATCGTTGAAG
AAGGAAGGCC AAGCCGGCCA GCGCAAGATT ACGCAGTACA CGCGCTACGG TACGGTCGTC
CTGGCAACGT TCCAGGCGCT GGGGATTGCA GTGGCACTCG AAGCGCAGCC GGGTCTGGTT
TTGGATCCGG GTCTGATGTT CCGGGCCACC GCCGTGATTA CGCTGGTGAC GGGCACCATG
TTCCTGATGT GGCTGGGTGA GCAGATCACC GAGCGTGGTC TGGGCAACGG GATCTCGATC
ATCATTTTCG GCGGGATTGC TGCCGGGCTG CCCAATGCGA TCGGCGGGTT GTTCGAGCTG
GTGCGTACGG GATCGATGGG GATTTTCTCG GCGATCCTGG TGGTGGCGAT TATTGGTGCG
GTGACGTTCG TGGTTGTGTT CATCGAACGG GGCCAGCGCA AGATCCTCGT CAATTACGCC
AAGCGGCAGG TTGGTAACAA GATTTATGGC GGACAGTCGT CGCATCTGCC GCTGAAGTTG
AATATGGCCG GGGTGATTCC GCCGATCTTT GCGTCGTCGA TCATTCTGTT CCCGGCCACG
ATCGCGGGCT GGTTTACAGC TGGCAACTCG ACGAATCCGG TTGCACGGGT TGTCAAGGAC
CTCGCGGCAA CGCTGTCGCC GGGTCAGCCG GTGTACATCC TGCTGTATGC AGCGGCGATC
ATCTTCTTCT GTTTCTTCTA CACCGCGCTG GTCTATAACA GCCGGGAAGT GGCGGATAAC
CTGAAGAAAA GTGGGGCGTT CATTCCGGGC ATCCGTCCGG GCGAGCAAAC CACGCGGTAT
ATCGACAAGA TTCTGGTGCG GTTGACCCTG GCGGGTGCGA TCTACATCAC GCTGGTGTGT
CTGTTGCCGG AGTTCTTGGT GCTGCGCTGG AATGTGCCGT TCTACTTCGG TGGGACATCC
CTGTTGATCA TCGTGGTTGT CACGATGGAC TTCATGGCGC AAGTGCAGTC CTACGTGATG
TCTCAGCAGT ACGAGTCTTT GATGAAGAAG GCGAATTTCA AGGGAAACCT GACGCTCCGC
TAA
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| Protein sequence | MAQAKNTAKY GDLRRRLVFL VLALLVYRIG AHIPVPGIDP DQLAQLFQRQ SGGILGMFNL
FSGGALSRFT VFALGIMPYI SASIIMQLLT IVLPQLESLK KEGQAGQRKI TQYTRYGTVV
LATFQALGIA VALEAQPGLV LDPGLMFRAT AVITLVTGTM FLMWLGEQIT ERGLGNGISI
IIFGGIAAGL PNAIGGLFEL VRTGSMGIFS AILVVAIIGA VTFVVVFIER GQRKILVNYA
KRQVGNKIYG GQSSHLPLKL NMAGVIPPIF ASSIILFPAT IAGWFTAGNS TNPVARVVKD
LAATLSPGQP VYILLYAAAI IFFCFFYTAL VYNSREVADN LKKSGAFIPG IRPGEQTTRY
IDKILVRLTL AGAIYITLVC LLPEFLVLRW NVPFYFGGTS LLIIVVVTMD FMAQVQSYVM
SQQYESLMKK ANFKGNLTLR
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