Gene Rpic12D_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2920 
Symbol 
ID8020592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3078717 
End bp3079712 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content64% 
IMG OID644831707 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_002982862 
Protein GI241664502 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000259754 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGCGA GCTTCCCCGA CCATCGTCCG CGCCGCATGC GCCGCGACGA TTTCTCCCGC 
CGCATGATGC GCGAATCGCG CCTCACTCCC GACGACCTCA TCTACCCCGT CTTCATCCTG
GAAGGCACCA ATGTGCGCCA AGCCGTGCCG TCCATGCCGG GCGTGGAGCG CGTGTCGATC
GATGTACTGT TGGGCGTGGC AGAGCAGTGC GTGCAGCTTG GCATTCCAGT GCTGGCGCTG
TTCCCTGTCA TCGAGCCGTC GCTCAAGACG CCGGATGGCA TCGAGGCCGC CAATGCGGAC
GGACTGATCC CGCGCGCGGT GAAAGCGCTC AAGGCGCGCT TCCCTGAACT GGGGATTCTG
ACCGACGTGG CGCTCGATCC GTACACGAGC CACGGCCAGG ACGGCGTGCT CGATGCCAAC
GGCTATGTGC TCAACGAAGA GACCGTCGAC ATTCTGATAC GCCAGGCGCT GGTGCAAGCC
GAGGCGGGCG TGGACATCGT CGCGCCGTCG GACATGATGG ATGGCCGCAT CGGTGCGATC
CGCCTGGCGC TGGAGAACGA CGACCACATC TACACCCGCA TCATGGCCTA TGCGGCAAAG
TACGCTTCGG CGTTCTACGG CCCGTTCCGT GATGCGGTGG GCTCGGCCGC CAATCTGGGC
AAGAGCAACA AGATGACTTA CCAGATGGAC CCGGCCAACT CGGACGAGGC GTTGCGCGAA
GTGGCACTCG ACATCGCCGA AGGCGCCGAC ATGGTGATGG TCAAGCCCGG CATGCCGTAC
CTCGATATCG TGCGACGCGT GAAGGATGAG TTCCGCTTTC CCACGTACGT CTATCAGGTC
AGCGGTGAAT ACGCGATGCT GAAGGCCGCC GCGCAGAACG GCTGGCTCGA TCACGACAAG
GTCGTGCTCG AGTCGCTGCT GGCGTTCAAG CGCGCCGGCG CGAACGGCAT CCTGACCTAT
TTCGCGCTGG ACGCCGCACG CCTGCTGCGC GGCTGA
 
Protein sequence
MIASFPDHRP RRMRRDDFSR RMMRESRLTP DDLIYPVFIL EGTNVRQAVP SMPGVERVSI 
DVLLGVAEQC VQLGIPVLAL FPVIEPSLKT PDGIEAANAD GLIPRAVKAL KARFPELGIL
TDVALDPYTS HGQDGVLDAN GYVLNEETVD ILIRQALVQA EAGVDIVAPS DMMDGRIGAI
RLALENDDHI YTRIMAYAAK YASAFYGPFR DAVGSAANLG KSNKMTYQMD PANSDEALRE
VALDIAEGAD MVMVKPGMPY LDIVRRVKDE FRFPTYVYQV SGEYAMLKAA AQNGWLDHDK
VVLESLLAFK RAGANGILTY FALDAARLLR G