Gene Rpic12D_2915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2915 
Symbol 
ID8020587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3072900 
End bp3073328 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content65% 
IMG OID644831702 
ProductSecreted repeat of unknown function 
Protein accessionYP_002982857 
Protein GI241664497 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00282236 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAGT CTGCAGCTTC CCAGAAGTTG TTCAATCCGC GCGCCGCGTT GGCCGGCGCC 
GCGCTGCTCG CTGCATTCGG TTTGGCAGGC TGCAGCGGCA TGGGCATGGG GGCGTCGTCG
ACGCCGTCGG CTGTTAAGGT GACCAACGGC ACGCTCACGG ATGAGCACGG CATGGCGCTT
TACACGTTCG ACCGTGACGC CACGGCCGGC AAGAGCGCCT GCAATGGCAA GTGCGCCGAC
AACTGGCCGC CGCTGGCCGC CAACGATGCC GATAAGCCGT CCGGCGATTA CACCATCATC
ACGCGCGACG ACGGCAAGAA GCAGTGGGCC TACCGCGGCA AGCCGCTCTA CCTCTGGACC
AAGGACAAGA TGCCGGGTGA CCAGACCGGC GATGGCTTCA TGAACGTTTG GCACATCGCC
AAGCCGTAA
 
Protein sequence
MSQSAASQKL FNPRAALAGA ALLAAFGLAG CSGMGMGASS TPSAVKVTNG TLTDEHGMAL 
YTFDRDATAG KSACNGKCAD NWPPLAANDA DKPSGDYTII TRDDGKKQWA YRGKPLYLWT
KDKMPGDQTG DGFMNVWHIA KP