Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2914 |
Symbol | |
ID | 8020586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3072293 |
End bp | 3072874 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644831701 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002982856 |
Protein GI | 241664496 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00295449 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGATC TGGCCAGCCG GCTGATTGCA CTCACCCCTC GCCTGCGCCG GCACGCGCGC GGCCTCGTGC GTGACGCGAG CCGCGCCGAC GACCTCCTCC AGGACACACT TGAACGCGCC TGGCGGTACC GCTGGCGCTT CCAATTGCGC CCCCGGCTCG GCCCGATCGG CCAAATCGGC CAGATCGGAG TCAAGGATGA GAGTGATGGG CTGTTTGCCT GGCTGCTGAC CATCATGCAT CGGCTGCACC TGAACGCCGT GCGCCGGCCC GATCGGCTCG AGCTGAGCGA GGTGCCCCCT GATATCCCCG TCGACGACGA CCCCGGGTTG CGCCGCGATC TGCTGCGCGC GCTGGCGACG CTGCCTGAAG ACCAGCGCGC GGTCTTGCTG CTCGTCGGTC TGGAGCAGTT CGCCTACAAG GAAGCCGCCG ACGTGCTGGG CGTGCCGGTC GGTACGGTGA TGTCGCGTCT GTCGCGTGCG CGCGAGCGGA TGCGTGTGGC ACTTGAGGGG GCGCCCATTG CATCCGGTGT ATTTTCGGCA CCCGGCGACG GCGGCAGCGC AATGCTGCAC CGCGTGAAGT GA
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Protein sequence | MSDLASRLIA LTPRLRRHAR GLVRDASRAD DLLQDTLERA WRYRWRFQLR PRLGPIGQIG QIGVKDESDG LFAWLLTIMH RLHLNAVRRP DRLELSEVPP DIPVDDDPGL RRDLLRALAT LPEDQRAVLL LVGLEQFAYK EAADVLGVPV GTVMSRLSRA RERMRVALEG APIASGVFSA PGDGGSAMLH RVK
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