| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2906 |
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| Symbol | |
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| ID | 8020578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3063556 |
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| End bp | 3064641 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644831693 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_002982848 |
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| Protein GI | 241664488 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0321305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGACGGG GTTTGTTGTC CGGCCTGCTG CGCCGCAATA TCGTCGGGAT AGATATCGGG
TCTTCCAGCG TCAAGGTGGT GGAGTTGTCC GCCAACGGCA AGCAGGGAGA TTTCCGTCTC
GAAAAATGCG CCAGCGAGCT GATTGAACGC AGTGCCGTCG CTGACGGCAA TCTGGTGAAT
ATCGATGCGG TGGGCAATGC GGTCAAGCGC GCCATCGCCA AGGCCGGCAT TCGCGGTAAG
GAAGCCGTGC TTGCCATTCC CGCGAGCCTG ACGGAATCGC AAACCGTCAG CCTGCCCGAC
AACCTGACCG AAGACGAGCT CTTCGTGCAG GTCGAGAGCG AAGCCAACCG GCTGTTTCCG
CCCTCGCAGA ACGTCAATTT CGACTATGTC GTGATCGGTC CGTCCGAAAC CGAAGGCGGG
ATCGGCGTGC GCGTCACGGC AACGGTGTCC GAGCGTGTGA CCGAGCGCGT GACCGCCGCC
GAGATGGCCG GTCTGAAAGC GATCGTCATG GACGTGGAAG AAAACGCCAT CCAGCGCGCC
ATGACGCACA TGCTGGCCGT CAAGCCGGAC GCCAACGAAA TTGAAACGCG CGACATGCCC
GTCGTGGCAA TGTTCCACTT GGGTGGTGCG CGCTCGCACG CACTGTTCTA CCAAGGCTGG
AAGGAACTGT ACGAGCAGCC GATGTCCGGC TCGGGCGACC AGCTCACGCA GAGCATCTCG
CGTCTGTTTT CCCTCGATCT GCTCAAGGCC GAGGTGAAGA AGCGCAAGAA CACTCTGCCC
GACGAATACC GCAGTCAGCT GCTCAAGCCC TCGCTCGAGA CGCTGGCCAT GGAAGTCGGT
CAGGCCATCC AGAATTTCCT GTCGACCTCG AGCGTCGGCC GCGTGGACGA GATCGTGCTC
TCGGGCGGTC ACGCATCGTT GCTGGGCGTG CAAACCGCCA TCCAGCAGCA GACGCAGATC
AATACGACGC TGGCCAACCC GTTCGCCAAC ATGGGCGCGG CCAAGAACGT CAACGCGCGC
TATCTCCAGC GCGATCTGCC GGCCTACATC GTCAGCGCGG GCCTTGCCCT GCGCGGGCTG
CAATAA
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| Protein sequence | MRRGLLSGLL RRNIVGIDIG SSSVKVVELS ANGKQGDFRL EKCASELIER SAVADGNLVN
IDAVGNAVKR AIAKAGIRGK EAVLAIPASL TESQTVSLPD NLTEDELFVQ VESEANRLFP
PSQNVNFDYV VIGPSETEGG IGVRVTATVS ERVTERVTAA EMAGLKAIVM DVEENAIQRA
MTHMLAVKPD ANEIETRDMP VVAMFHLGGA RSHALFYQGW KELYEQPMSG SGDQLTQSIS
RLFSLDLLKA EVKKRKNTLP DEYRSQLLKP SLETLAMEVG QAIQNFLSTS SVGRVDEIVL
SGGHASLLGV QTAIQQQTQI NTTLANPFAN MGAAKNVNAR YLQRDLPAYI VSAGLALRGL
Q
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