Gene Rpic12D_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2903 
Symbol 
ID8020575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3061709 
End bp3062254 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content61% 
IMG OID644831690 
ProductPilus assembly protein PilP 
Protein accessionYP_002982845 
Protein GI241664485 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3168] Tfp pilus assembly protein PilP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.820012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0834769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGCC GCACCATGAG CCGTCGCCGC ATGTCGCATG TTCTGCGTCT GTCGCCGCTG 
TGCCTGGCCG TCGTGCTGAC GGCCTGCGGC GCGAGCGAAG ACGATGAATT GCAGCAATGG
ATGCAGCAAG CGCGCCAGAG CGTCAGTACG ACCGTGCCGC CGCTGCCCGA ACCCAAGCCT
TACGCGCCGC GCGAATACAC GACCACCAAG CAGACTGATC CGTTCAGTGT GCAAAAGGTG
GCAGAACTTT CGCGCGCGCA AAACGAATCG CCGGAACCGA ATCGCCGTCG CGAGCCGCTG
GAAGACTATC CGCTGGAAGC CTTCAAGCTG GTCGGGACGA TGAAGCGCAA TGGCGAGACG
GAAGCCGTCG TGTCTGTCGG GGACAAGACG CAGCATGTGC ATGTGGGGCA GTACATCGGA
CAAAACTATG GTCGCATCCT CCGCATCGGA GACCAGGAAC TCACCCTGCG TGAGCTGGTG
CGCGAAGGCA CGACCGAATG GAAAGAAAAA ATGACGACCC TGAAAGTTCA GGAGAGCGCG
CAATGA
 
Protein sequence
MRGRTMSRRR MSHVLRLSPL CLAVVLTACG ASEDDELQQW MQQARQSVST TVPPLPEPKP 
YAPREYTTTK QTDPFSVQKV AELSRAQNES PEPNRRREPL EDYPLEAFKL VGTMKRNGET
EAVVSVGDKT QHVHVGQYIG QNYGRILRIG DQELTLRELV REGTTEWKEK MTTLKVQESA
Q