Gene Rpic12D_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2901 
SymbolaroK 
ID8020573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3058836 
End bp3059375 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content65% 
IMG OID644831688 
Productshikimate kinase 
Protein accessionYP_002982843 
Protein GI241664483 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.12691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGG GCAAGACCAC GGTCGGCCGG GCGGTGGCGC GCCGGCTCGA TCTGCCGTTC 
TTCGACTCCG ACCATGAGAT CGAGGCGCGG TGCGGCGTGC GCGTGCCGGT TATTTTCGAG
CACGAAGGTG AGGTGGGCTT TCGCGATCGA GAAACCCACA TGATCGACGA GCTGACCGCG
CGCGATGGCG TGGTCATCGC CACGGGTGGG GGCGCCGTGT TGCGGGCCGA AAACCGGGCG
TTCCTGCGCG AGCGTGGCAC GGTGATCTAC CTGCGCGCCA ATCCGCATGA CCTGTATCTG
CGCACGCGCC ACGACAAGAA CCGGCCGCTG CTGCAGACAG AGAACCCGCG CGCCAAGCTG
GAGGAGCTGC ATGCGATCCG CGATCCGCTG TACCGTGACG TGGCGCATTT CGTCATCGAA
ACCGGCAAGC CCACCGTCGC GCAGCTTGTT AATATGGTCT TGATGCAACT CGAAGTGGCC
GGCATTGTGG CTCCGCCCGC AGGCTCTTCC ACCTCCTCGC AAGTCTCCCC ACAGTCATGA
 
Protein sequence
MGAGKTTVGR AVARRLDLPF FDSDHEIEAR CGVRVPVIFE HEGEVGFRDR ETHMIDELTA 
RDGVVIATGG GAVLRAENRA FLRERGTVIY LRANPHDLYL RTRHDKNRPL LQTENPRAKL
EELHAIRDPL YRDVAHFVIE TGKPTVAQLV NMVLMQLEVA GIVAPPAGSS TSSQVSPQS