Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2901 |
Symbol | aroK |
ID | 8020573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3058836 |
End bp | 3059375 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644831688 |
Product | shikimate kinase |
Protein accession | YP_002982843 |
Protein GI | 241664483 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.12691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGG GCAAGACCAC GGTCGGCCGG GCGGTGGCGC GCCGGCTCGA TCTGCCGTTC TTCGACTCCG ACCATGAGAT CGAGGCGCGG TGCGGCGTGC GCGTGCCGGT TATTTTCGAG CACGAAGGTG AGGTGGGCTT TCGCGATCGA GAAACCCACA TGATCGACGA GCTGACCGCG CGCGATGGCG TGGTCATCGC CACGGGTGGG GGCGCCGTGT TGCGGGCCGA AAACCGGGCG TTCCTGCGCG AGCGTGGCAC GGTGATCTAC CTGCGCGCCA ATCCGCATGA CCTGTATCTG CGCACGCGCC ACGACAAGAA CCGGCCGCTG CTGCAGACAG AGAACCCGCG CGCCAAGCTG GAGGAGCTGC ATGCGATCCG CGATCCGCTG TACCGTGACG TGGCGCATTT CGTCATCGAA ACCGGCAAGC CCACCGTCGC GCAGCTTGTT AATATGGTCT TGATGCAACT CGAAGTGGCC GGCATTGTGG CTCCGCCCGC AGGCTCTTCC ACCTCCTCGC AAGTCTCCCC ACAGTCATGA
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Protein sequence | MGAGKTTVGR AVARRLDLPF FDSDHEIEAR CGVRVPVIFE HEGEVGFRDR ETHMIDELTA RDGVVIATGG GAVLRAENRA FLRERGTVIY LRANPHDLYL RTRHDKNRPL LQTENPRAKL EELHAIRDPL YRDVAHFVIE TGKPTVAQLV NMVLMQLEVA GIVAPPAGSS TSSQVSPQS
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