Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2897 |
Symbol | |
ID | 8020569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3054684 |
End bp | 3055436 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644831684 |
Product | protein of unknown function DUF1568 |
Protein accession | YP_002982839 |
Protein GI | 241664479 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0773075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTT TCTCCACCCG TTTTTCCATG GCTCGCCTGC CTCGTCTCAG CCCAATCGAT GTCCCGGTGC ACGTGTTGCA GCGCGGCAAC AATCGCCAGA CCGTTTTCCG CGGCGACGAC GACTACGCGT TCTATCTCGA CACGCTGCGC ATGGCCGCCC GCGAGCATGA CTTCGCCATC CATGGGTTTT CGCTGATGCC GAATCACGTC CATCTGGTGG GGACACCCAA GGTGGCGGAC AGTCTTTCGC GAACGCTGCA GGCTGTGGGA CGGCGCTATA CGCGCTACTT CAACGCTGCG GCGGATCGCA GCGGCACGTT GTGGGAAGGG CGTTTCCGAT CGACGGTACT GGACCCCGCC GAGTGGGTGC TGCCGATCCT GTTGTATGTG GAATCGAACG CGGTGCGCGC GGGGCTCGTC AGCACGCCGG AAGAAGATCG ATGGAGCACG TATCGTCACC ACGTCGGCAT TCAATCCATT CCGTGGGTGA GTGACCACTT CTGTTACTGG CGCCTTGGCA ACACGCCTTT TGAGCGCCAG TCGCGCTACC GAACGTTGTG GCATGAAGGT TTGGGCTCCG ACCAGTTCGC GCAGATTCGC CAGCATGTGC ACAGTGGTTG GCCGCTCGGC AATGAGGCGT TTCTCGCGAC ACTTGCGCGC ACCGGAGGCC GTCGCGTTGC GCCATTGCCC AAGGGGCGGC CGCCGCGCCA AACCACGGCG GTGGAAGCGG AGGGCAGCGC GCGCACCGAA TAG
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Protein sequence | MALFSTRFSM ARLPRLSPID VPVHVLQRGN NRQTVFRGDD DYAFYLDTLR MAAREHDFAI HGFSLMPNHV HLVGTPKVAD SLSRTLQAVG RRYTRYFNAA ADRSGTLWEG RFRSTVLDPA EWVLPILLYV ESNAVRAGLV STPEEDRWST YRHHVGIQSI PWVSDHFCYW RLGNTPFERQ SRYRTLWHEG LGSDQFAQIR QHVHSGWPLG NEAFLATLAR TGGRRVAPLP KGRPPRQTTA VEAEGSARTE
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