Gene Rpic12D_2897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2897 
Symbol 
ID8020569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3054684 
End bp3055436 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID644831684 
Productprotein of unknown function DUF1568 
Protein accessionYP_002982839 
Protein GI241664479 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0773075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTT TCTCCACCCG TTTTTCCATG GCTCGCCTGC CTCGTCTCAG CCCAATCGAT 
GTCCCGGTGC ACGTGTTGCA GCGCGGCAAC AATCGCCAGA CCGTTTTCCG CGGCGACGAC
GACTACGCGT TCTATCTCGA CACGCTGCGC ATGGCCGCCC GCGAGCATGA CTTCGCCATC
CATGGGTTTT CGCTGATGCC GAATCACGTC CATCTGGTGG GGACACCCAA GGTGGCGGAC
AGTCTTTCGC GAACGCTGCA GGCTGTGGGA CGGCGCTATA CGCGCTACTT CAACGCTGCG
GCGGATCGCA GCGGCACGTT GTGGGAAGGG CGTTTCCGAT CGACGGTACT GGACCCCGCC
GAGTGGGTGC TGCCGATCCT GTTGTATGTG GAATCGAACG CGGTGCGCGC GGGGCTCGTC
AGCACGCCGG AAGAAGATCG ATGGAGCACG TATCGTCACC ACGTCGGCAT TCAATCCATT
CCGTGGGTGA GTGACCACTT CTGTTACTGG CGCCTTGGCA ACACGCCTTT TGAGCGCCAG
TCGCGCTACC GAACGTTGTG GCATGAAGGT TTGGGCTCCG ACCAGTTCGC GCAGATTCGC
CAGCATGTGC ACAGTGGTTG GCCGCTCGGC AATGAGGCGT TTCTCGCGAC ACTTGCGCGC
ACCGGAGGCC GTCGCGTTGC GCCATTGCCC AAGGGGCGGC CGCCGCGCCA AACCACGGCG
GTGGAAGCGG AGGGCAGCGC GCGCACCGAA TAG
 
Protein sequence
MALFSTRFSM ARLPRLSPID VPVHVLQRGN NRQTVFRGDD DYAFYLDTLR MAAREHDFAI 
HGFSLMPNHV HLVGTPKVAD SLSRTLQAVG RRYTRYFNAA ADRSGTLWEG RFRSTVLDPA
EWVLPILLYV ESNAVRAGLV STPEEDRWST YRHHVGIQSI PWVSDHFCYW RLGNTPFERQ
SRYRTLWHEG LGSDQFAQIR QHVHSGWPLG NEAFLATLAR TGGRRVAPLP KGRPPRQTTA
VEAEGSARTE