| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2896 |
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| Symbol | |
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| ID | 8020568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3049710 |
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| End bp | 3054422 |
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| Gene Length | 4713 bp |
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| Protein Length | 1570 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644831683 |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_002982838 |
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| Protein GI | 241664478 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.113267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACAAC ATTCCTTCCC CATCACGCCG TCGGCCCAGG GTCTGTACGA CCCGACCAAT
GAACACGACG CTTGCGGCGT CGGCTTCGTC GCCCACATCA AGGGCAAGAA GAGCCACGAG
ATCGTCCAGC AGGGCTTGCG CATCCTGCAC AACCTCGACC ACCGGGGCGC TGTGGGCGCT
GACCCGCTGA TGGGCGACGG CGCAGGCATC CTGCTGCAGA TTCCCGACCA GTTCTTCCGT
GAAGAAATGG CCAAGCAGGG TATCAACCTG CCGCCGGCCG GCGAATACGG CGTCGGCATG
ATCTTCCTGC CGAAGGAACA CGCTTCGCGC CTGGCCTGTG AGCAGGAACT TGAGCGCACC
GTGCGTCTGG AAGGCCAGGT TGTGCTGGGC TGGCGCGATG TTCCGGTCGA CAAGACCATG
CCGATGTCGC CGACGGTGCA GAAGACCGAG CCGGTGATCC GCCAGATCTT CATCGGGCGC
GGCCGCGACA TCATGACCAC CGACGCGCTG GAGCGGAAGC TGTACGTGAT CCGCAAGACC
GCCAGCCACG CCATCCAGGC GCTCAAGCTC AAGCACGGCA AAGAATACTT CGTGCCCTCG
ATGTCGGCGC GCACGATCGT CTACAAGGGC CTGCTGCTTT GCGAACAGGT CGGCCGGTAC
TACCAGGATC TGGCTGATCC GCGCACGGTG TCGGCGCTTG CGCTGGTGCA CCAGCGTTTC
TCGACCAACA CGTTCCCTGC ATGGGAACTG GCGCACCCGT ACCGCATGGT TGCGCACAAC
GGCGAAATCA ACACCGTCAA GGGCAACGTC AACTGGATCA ACGCACGTAC GGGCGGCATC
TCGTCGCCGG TGCTGGGCGA TGACCTGCCC AAGCTGTGGC CGCTGATCTA TCCGGGCCAA
TCCGATACGG CTTCGTTCGA CAACTGCCTC GAACTGCTGA CGATGGCGGG CTATCCGCTG
GCCCAGGCGA TGATGATGAT GATTCCGGAA GCGTGGGAAC AACACACGCT GATGGACGAC
AATCGTCGCG CCTTCTACGA ATACCATGCC GCGATGATGG AGCCGTGGGA CGGCCCCGCC
GCCATCTGCT TTACCGACGG CCGCCAGATC GGCGCAACGC TCGACCGTAA CGGCCTGCGT
CCGGCGCGTT ATTACGTGAC CGATGACGAC ATGGTCGTGA TGGCTTCGGA AGCCGGCGTG
CTGCCGATTC CCGAGTCCCG CATCGTCAAG AAGTGGCGTC TGCAGCCGGG CAAGATGTTC
CTGATCGACA TGGAGCAGGG CCGCATCATC GACGACAAGG AACTCAAGGA CAATCTGGCC
AACGCCAAGC CGTACAAGAG CTGGATTGAT GCCGTGCGCA TCAAGCTCGA CGAGCTGGAA
GCCAAGCCTG AAGACGTGGC CGCCGAGACC AAGCCGGCCG CCAAGCTGCT TGACCGTCAG
CAGGCGTTTG CCTACACCCA GGAAGACGTC AAGTTCCTGA TGGCCCCGAT GGCCGCCAAC
GGCGAAGAGG CCGCCGGCTC TATGGGCAAC GACAGCCCGC TGGCCGTGCT GTCCTCGAAG
AACAAGACGC TCTACAACTA CTTCAAGCAA CTGTTCGCGC AGGTCACGAA CCCGCCGATC
GACCCGATCC GCGAAAACGT GGTGATGTCG CTCGTCTCGT TCATCGGGCC GAAGCCGAAC
CTGCTTGAGC TGAACAACAT CAACCCGCCG ATGCGCCTTG AAGTGAGCCA GCCCGTGCTG
GACTTCAAGG ACATGGCGAA GATCCGCAAC ATCGAGCACT ACACCGGCGG CAAGTTCATG
GCTTACGAGC TGGACATCTG CTATCCGGTG GCGTGGGGCA AGGAAGGCAT CGAAGCGCGC
CTGGCTTCGC TGTGCGCCGA GGCTGTCGAT GCGGTCAAGT CGGGCTACAA CATCCTGATC
GTTTCGGACC GCGCGGTCGA CGAGAAGCAG GCCGCGATTC CCGCGCTGCT GGCCACGTCT
GCCATCCACC ATCACCTGGT GGACAAGGGC TTGCGCACGA GCACGGGTCT GGTCGTTGAA
ACAGGTTCGG CCCGTGAAGT GCACCACTTC GCACTGCTGG CCGGCTACGG TGCAGAAGCC
GTGCACCCGT ACCTGGCAAT GGAAACGCTG GCCGAACTCG CGCCGAGTCT GGGTCTGACG
GCCGAGAAGG CCATCTACAA CTTCACCAAG GCGATCGGCA AGGGCCTGCA CAAGGTAATG
TCCAAGATGG GCATCTCGAC GTACATGTCG TACACCGGCG CGCAGATCTT CGAAGCGATC
GGCCTGTCGC GCGAACTGGT CGACAAGTAC TTCCAGGGCA CGGCATCCAA CGTGGGCGGC
ATCGGCATCT TCGAGGTGGC TGAAGAGGCG CTGCGCCTGC ACCGCGACGC CTTTGGCGAT
GCACCGGTGC TGGCGAACAT GCTGGACGCC GGCGGCGAAT ACGCCTACCG CGTCCGCGGC
GAAGAGCACA TGTGGACGCC GGATTCGATC GCCAAGCTGC AGCATGCGAC GCGCGCGAAT
TCGTACCAGA CGTACAAGGA ATACGCGAAC CTGATCAACG ATCAGAGCAA GCGCCACATG
ACGCTGCGCG GCCTGTTCGA GTTCAAGGTG GACCCGGCGC GCGCGATTCC GCTGGAAGAA
GTCGAACCGG CCAAGGAGAT CGTCAAGCGC TTCGCGACCG GCGCCATGTC GCTGGGTTCG
ATCAGCACGG AAGCGCACAC CACGCTGGCC GTGGCGATGA ACCGTATCGG CGGCAAGTCG
AACACGGGCG AAGGCGGTGA AGACGAGCGC CGTTATCGCA ACGAACTGCG CGGCATTCCC
ATCAAGCAGG GCACGAAGCT GTCGGACGTG ATCGGCCGCG AAGTGGTCGA GCGCGATCTG
GAACTGCAAG AGGGCGATTC GCTGCGCTCG AAAATCAAGC AGGTAGCCTC GGGCCGCTTT
GGCGTGACGG CCGAGTACCT GGCGTCGGCT GATCAGATCC AGATCAAGAT GGCGCAGGGC
GCCAAGCCCG GCGAGGGCGG TCAACTGCCC GGCCACAAGG TGACGGATTA CATCGGCAAG
CTGCGTTATG CAGTGCCGGG CGTGGGCCTG ATCTCGCCGC CGCCACACCA CGATATCTAT
TCGATTGAAG ATCTGGCGCA GCTCATCCAC GATCTGAAGA ACGTGAACCC GCGTTCGGAC
GTGTCGGTCA AGCTGGTGTC GGAAGTCGGC GTGGGTACGG TGGCGGCAGG TGTCGCCAAG
GCCAAGGCAG ACCACGTGGT GATCGCCGGT CATGACGGTG GCACGGGCGC CTCGCCGTGG
TCGTCGATCA AACACGCCGG TACGCCCTGG GAACTGGGCC TGGCCGAGAC GCAGCAGACG
CTGATGCTCA ACGGCCTGCG CAACCGCATC CGCGTGCAGG CTGACGGCCA GATGAAGACC
GGGCGCGACG TTGTGATCGG CGCGCTGCTG GGCGCTGACG AATTCGGCTT TGCGACCGCC
CCGCTGGTCG TCGAAGGCTG CATCATGATG CGCAAGTGCC ACCTGAACAC CTGCCCGGTG
GGCGTGGCGA CGCAGGATCC GGTGCTGCGC AAGAAGTTCT CGGGCAAACC TGAGCACGTG
GTGAACTACT TCTTCTTCGT GGCCGAGGAA GTGCGCGAAA TCATGGCGCA ACTGGGCATC
CGCACGTTCA ACGAACTGAT CGGCCGCGCC GACCTGCTGG ACACAAAGGC CGGTATCGAA
CACTGGAAGG CCCGCGGCCT GGACTTCGCG CGCATCTTCT ACCAGCCGGC CAAGAAGGAA
GGCGAGCCGT GCTACCAGGT CGATGTGCAA GACCACGGTC TGGATCGTGC ACTGGATCAC
CAGCTCATCG AGAAGTCCAA GGCTGCGCTG GAGAAAGGCG AGCGTGTTTC GTTCATCCAG
CCGGTGCGCA ACGTCAACCG CACGGTCGGC GCGATGCTCT CGGGAGAAGT CGCCAAGCGT
TATGGCCACG AGGGTTTGCC CGATGACTCG ATCCACGTGC AGATGCAGGG CACGGCCGGC
CAGTCGTTCG GCGCGTTCCT GGCGCATGGC ATCACGCTGG ACCTGGTGGG CGACGGCAAC
GACTACGTGG GCAAGGGCCT GTCGGGCGGC CGCGTGATCG TGCGTCCGCC GCACGAGTTC
CGCGGTGAGC CGACCAACAA CATCATCGTC GGCAACACCG TGCTGTACGG TGCGCTGGCT
GGTGAGGCGT TCTTCAACGG CGTGGCCGGC GAGCGCTTCG CGGTGCGCAA CTCCGGCGCC
ACCACGGTGG TGGAAGGCAC GGGCGACCAC GGCTGCGAAT ACATGACCGG CGGCACGGTT
GTCGTGCTCG GTGCCACCGG CCGCAACTTC GCGGCAGGCA TGTCGGGCGG CGTGGCTTAC
GTCTATGACG AAGACGGCCT GTTCGACAAG CGCTGCAACA CGGCAATGGT GGCGCTGGAA
TCCGTGCTTT CGGCGGCCGA CCAGGAGAAG GCCCACACGC CGTCGACCTG GCACAAGGTG
AACGGCGAGC GCGTGCTCGA CGAGCAACTG CTCAAGGCGC TGGTGGAAAA GCACTTCCGC
TACACCGGCT CTGAGCGTGC CAAGGAACTG CTGGCCGACT GGAACAATGC GCGCCGTCGT
TTCGTCAAGG TCTTCCCGAC CGAGTACAAG CGTGCACTGA CCGAGATGTA CGAGCGGGAA
CAGGAAGCGG GCCGCGAACA GATCGCCGCC TGA
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| Protein sequence | MEQHSFPITP SAQGLYDPTN EHDACGVGFV AHIKGKKSHE IVQQGLRILH NLDHRGAVGA
DPLMGDGAGI LLQIPDQFFR EEMAKQGINL PPAGEYGVGM IFLPKEHASR LACEQELERT
VRLEGQVVLG WRDVPVDKTM PMSPTVQKTE PVIRQIFIGR GRDIMTTDAL ERKLYVIRKT
ASHAIQALKL KHGKEYFVPS MSARTIVYKG LLLCEQVGRY YQDLADPRTV SALALVHQRF
STNTFPAWEL AHPYRMVAHN GEINTVKGNV NWINARTGGI SSPVLGDDLP KLWPLIYPGQ
SDTASFDNCL ELLTMAGYPL AQAMMMMIPE AWEQHTLMDD NRRAFYEYHA AMMEPWDGPA
AICFTDGRQI GATLDRNGLR PARYYVTDDD MVVMASEAGV LPIPESRIVK KWRLQPGKMF
LIDMEQGRII DDKELKDNLA NAKPYKSWID AVRIKLDELE AKPEDVAAET KPAAKLLDRQ
QAFAYTQEDV KFLMAPMAAN GEEAAGSMGN DSPLAVLSSK NKTLYNYFKQ LFAQVTNPPI
DPIRENVVMS LVSFIGPKPN LLELNNINPP MRLEVSQPVL DFKDMAKIRN IEHYTGGKFM
AYELDICYPV AWGKEGIEAR LASLCAEAVD AVKSGYNILI VSDRAVDEKQ AAIPALLATS
AIHHHLVDKG LRTSTGLVVE TGSAREVHHF ALLAGYGAEA VHPYLAMETL AELAPSLGLT
AEKAIYNFTK AIGKGLHKVM SKMGISTYMS YTGAQIFEAI GLSRELVDKY FQGTASNVGG
IGIFEVAEEA LRLHRDAFGD APVLANMLDA GGEYAYRVRG EEHMWTPDSI AKLQHATRAN
SYQTYKEYAN LINDQSKRHM TLRGLFEFKV DPARAIPLEE VEPAKEIVKR FATGAMSLGS
ISTEAHTTLA VAMNRIGGKS NTGEGGEDER RYRNELRGIP IKQGTKLSDV IGREVVERDL
ELQEGDSLRS KIKQVASGRF GVTAEYLASA DQIQIKMAQG AKPGEGGQLP GHKVTDYIGK
LRYAVPGVGL ISPPPHHDIY SIEDLAQLIH DLKNVNPRSD VSVKLVSEVG VGTVAAGVAK
AKADHVVIAG HDGGTGASPW SSIKHAGTPW ELGLAETQQT LMLNGLRNRI RVQADGQMKT
GRDVVIGALL GADEFGFATA PLVVEGCIMM RKCHLNTCPV GVATQDPVLR KKFSGKPEHV
VNYFFFVAEE VREIMAQLGI RTFNELIGRA DLLDTKAGIE HWKARGLDFA RIFYQPAKKE
GEPCYQVDVQ DHGLDRALDH QLIEKSKAAL EKGERVSFIQ PVRNVNRTVG AMLSGEVAKR
YGHEGLPDDS IHVQMQGTAG QSFGAFLAHG ITLDLVGDGN DYVGKGLSGG RVIVRPPHEF
RGEPTNNIIV GNTVLYGALA GEAFFNGVAG ERFAVRNSGA TTVVEGTGDH GCEYMTGGTV
VVLGATGRNF AAGMSGGVAY VYDEDGLFDK RCNTAMVALE SVLSAADQEK AHTPSTWHKV
NGERVLDEQL LKALVEKHFR YTGSERAKEL LADWNNARRR FVKVFPTEYK RALTEMYERE
QEAGREQIAA
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