Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2890 |
Symbol | |
ID | 8020562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3043657 |
End bp | 3044460 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644831677 |
Product | VacJ family lipoprotein |
Protein accession | YP_002982832 |
Protein GI | 241664472 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.194076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.292718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA CAACATCCAT CCAAATGCTG CGCGGCTTTG CGCTGGCTGT GGCTGCAGGC GCCACGATGC TGGCCGGCTG TGCGACGGGG CCGAATGCCA ATCCGGCTGA CCCGATCGAA CCGTTCAACC GCGAAGTCTT CCGCATCAAC GAAGACCTCG ACAAGGGCGT GCTGAAGCCG GTTGCGCAAA CGTATGTCGA TGTGGTGCCG TCGCCAGCGC GCACGGCGGT GTCGAATTTC TTCTCGAATG CGGGCGATGT CTATTCGGCC GTCAACAACC TGCTGCAATT GAAGGGCACC GCCGCGCTGG AAGACACCAT GCGCGTGGCG ATCAATACCG TGCTGGGTCT GGGTGGCCTG ATCGACATTG CGTCGGACGC CGGCCTGCCC AAGCACAAGG AAGACTTCGG CCAGACGCTG GGCGTATGGG GTGTGCCGTC GGGTCCGTAC GTCGTGTGGC CGCTGCTCGG CCCGAGCACT GCACGTGACA CCGTGGGGTT CCTGGTCGAC TGGCAGATGG ACCCGCTCAC GTACTGGCAC GACAGCGCGA TCACCTACTC GCTGGCCGCG TTGCGCGTGG TTGACGTGCG CGCGAACCTG CTTGGAGCCA GCAATGTGTT CGAACAGGCC GCGGTCGACA AGTACACCTT CCTGCGCGAT GCCTATTTGC AGCGCCGCCG CTACCTGATC TATGACGGCA ACCTGCCGGA AGACCAGGAC AACACGAAGT CGCCGGATAC CGGTGACGCG ACGGTCTCGC CGTACCATCG CTTCACCCCC AACTGGCCGG TGTTCCGCCG CTGA
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Protein sequence | MKITTSIQML RGFALAVAAG ATMLAGCATG PNANPADPIE PFNREVFRIN EDLDKGVLKP VAQTYVDVVP SPARTAVSNF FSNAGDVYSA VNNLLQLKGT AALEDTMRVA INTVLGLGGL IDIASDAGLP KHKEDFGQTL GVWGVPSGPY VVWPLLGPST ARDTVGFLVD WQMDPLTYWH DSAITYSLAA LRVVDVRANL LGASNVFEQA AVDKYTFLRD AYLQRRRYLI YDGNLPEDQD NTKSPDTGDA TVSPYHRFTP NWPVFRR
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