Gene Rpic12D_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2889 
Symbol 
ID8020561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3042869 
End bp3043504 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID644831676 
Producttoluene tolerance family protein 
Protein accessionYP_002982831 
Protein GI241664471 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.855071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.2054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGA AGCTTTTCCG CACCCTGTTC GCCGGCCTCA CGCTGACGGC TGCCGTGGCA 
GCCGCGCCGG TCCACGCCCA GGACGCCGAC GCACAGGCGA CGGTCAAGAC GGCTGTGGAC
GACGTGCTCA GCACCATCAA GAGCGATCCG GAACTGCGCG GCGGCAACAT GACCAAGGTG
TTCCAGCTGG TGGATCAAAA GATTGTGCCG CGCGCCGATT TCAAGCGCAC CACACAGATC
GCGATGGGCC GTTTCTGGAA CCAGGCGTCG CCGGAGCAAC AGCAACAGAT CCAGGAAGGC
TTCAAAACGC TGCTGATCCG CACTTACGCC GGCGCCCTGT CGAATGTGAA GAACCAGACC
GTTTCGTATA AGCCGTTCCG GGCGGCCGCA GATGACACCG ATGTGGTGGT GCGCTCAACC
GTGAACAACA ACGGCGAACC AGTGGCCCTG GACTACCGTT TGGAAAAGAC GGCCGGTGGC
TGGAAGGTGT ACGACATCAA CATCAGCGGC CTCTGGCTGT CGGAGACGTA CAAGAACCAG
TTTGCCGATG TCATCAGCAA GCGCGGCGGC GTGGCTGGGC TGGTGAGCTT CCTGAACGAG
CGCAACTCGC AGCTCGAGAA GGGTCCGGCA AAGTAA
 
Protein sequence
MLKKLFRTLF AGLTLTAAVA AAPVHAQDAD AQATVKTAVD DVLSTIKSDP ELRGGNMTKV 
FQLVDQKIVP RADFKRTTQI AMGRFWNQAS PEQQQQIQEG FKTLLIRTYA GALSNVKNQT
VSYKPFRAAA DDTDVVVRST VNNNGEPVAL DYRLEKTAGG WKVYDINISG LWLSETYKNQ
FADVISKRGG VAGLVSFLNE RNSQLEKGPA K