Gene Rpic12D_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2871 
SymboltatB 
ID8020543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3030046 
End bp3030558 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID644831658 
Productsec-independent translocase 
Protein accessionYP_002982813 
Protein GI241664453 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0579485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC TCGGCATTTC CAAGCTGGCG CTGATTGGCA TGGTGGCGCT CGTCGTCATC 
GGGCCGGAGC GTCTTCCCAA GGTGGCGCGC ACCGCTGGCG CCTTGCTTGG CCGCGCACAG
CGCTACATCG CCGATGTGAA GGCCGAGGTC AGCCGCGAAA TCGAGCTCGA GGAACTGCGC
AAGATGCGCA CCGACTTCGA GCAGGCCGCG CGCAATGTGG AGCAGACCAT CCACCAGGAG
GTCAGCAAAC ACACGACGGA GATCAACGAG CGCCTGAACG AGGCGCTGGG TGACCCGGCC
CAGACGTCGA CCTCCGCGCC CGACTGGCGC CCCGCGCCGG GCAAGTCGCG CAACGGCCGT
AACAGCTGGC GCAACAAGCA GCTCTCGATG CCCAAGTGGT ACCGCCAGAA GCAGGGCGTG
CGCATGTGGG CGCAATCGGG TGCGGCACGC GTCAAGCGCC ATCGTCCGCC CATCGTTGCC
GCACAGTCGC GTGCGCGCTC CTTCTTCGAA TGA
 
Protein sequence
MIDLGISKLA LIGMVALVVI GPERLPKVAR TAGALLGRAQ RYIADVKAEV SREIELEELR 
KMRTDFEQAA RNVEQTIHQE VSKHTTEINE RLNEALGDPA QTSTSAPDWR PAPGKSRNGR
NSWRNKQLSM PKWYRQKQGV RMWAQSGAAR VKRHRPPIVA AQSRARSFFE