Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2865 |
Symbol | |
ID | 8020537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3022653 |
End bp | 3023354 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644831652 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002982807 |
Protein GI | 241664447 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.176419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATTT TGCTGGTGGA GGATGAGGAA GAATTGGCCG CATGGCTGGC GCGCGCGCTG GCGCAAAGCG GCTTCGTGAT CGAGCGCGCC GCTGATGGCG TCATCGCCGA AGCCTTCCTG GGCTCCGGAG AATTTGACGC AGTGGTGCTG GACCTGCGCT TGCCGCGCAA GGATGGCTTT GCCGTGCTGG CCGACATGCG CGCGCGCGAC GATCGCACGC CGGTATTGAT CCTCACCGCG CAGGGCGCAC TGGATGAACG CGTGCGCGGG CTCAATGCCG GCGCGGACGA TTTCCTCACC AAGCCGTTCG CGTTGTCCGA GCTGGAAGCG AGGTTGATGG CGCTCATCCG CCGCAGCCGC GGCCGGGCGT TTCCGCGTCT GCGTTGCGGG CCCCTGGAGT TCGACACCGG ACGCAAGGCA TTCCTGCTGT CGGGCGAGCC GCTGGCGCTC ACGCCGCGTG AGCACGCTGC GCTGTCCGCA CTGCTGCACA AGACCGGCCA GCCGATCAGC AAGGTGCATT TGTTCGACAA GGTCTTCAAC CTGGACAGCG ATTCGAGCCC CGACGCGGTG GAGGTGGTCG TGCACCGCCT GCGCAAGAAG CTGGCGGGCA CGGGCGTGCA GATCGTCACC GTACGGGGGC TGGGTTACCT GCTCGAAGCC GGCGATGGTG AAGCGCCCGC CGCCAGCGAC AGCAGCGCAT GA
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Protein sequence | MRILLVEDEE ELAAWLARAL AQSGFVIERA ADGVIAEAFL GSGEFDAVVL DLRLPRKDGF AVLADMRARD DRTPVLILTA QGALDERVRG LNAGADDFLT KPFALSELEA RLMALIRRSR GRAFPRLRCG PLEFDTGRKA FLLSGEPLAL TPREHAALSA LLHKTGQPIS KVHLFDKVFN LDSDSSPDAV EVVVHRLRKK LAGTGVQIVT VRGLGYLLEA GDGEAPAASD SSA
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