| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2862 |
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| Symbol | |
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| ID | 8020534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3018274 |
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| End bp | 3019488 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644831649 |
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| Product | protease Do |
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| Protein accession | YP_002982804 |
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| Protein GI | 241664444 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.167767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCC GCTTTTGGCT GTTTTTTGCG CAAGCCGTCA CGGTCGTCCT GGCCGTCTGG
TTTGTGATCG CCACGCTCAA GCCTGATTGG CTGCAGCGCG GCAGGGTCGC AGTGCAATCC
GGCTCGCCCA TCGTCGCGCT GAAGGAAGTC GCGCCGATCG GCCACGGCGG CACCTCCAGC
AACTCCTACG CAGAAGCGGC CAAGGTCGCG ATGCCGGCGG TGGTCAACAT CTTCAGCAGC
AAGAACGCGC CGAAGCGTGG CACCAACCCT CAAGCCAGCG CCGATCCGTG GTTTCGCTTC
TTCTTCGGCG ACCGCGCTCC CGAGCAGCGC CAGGAACCGA CGGCCAGCCT CGGCTCTGGT
GTGATCGTCA GTTCAGAAGG CTACATTCTA ACGAACCACC ACGTGGTGGA CGGCGCTGAC
GAAATCGAGG TCGCCCTGAC CGACGGCCGC AAGGCCAACG CGAAGGTGGT CGGCTCCGAT
CCCGAGACCG ACCTGGCCGT CCTCAAGATC AATCTTCCGA ATCTGCCTGC CATTACGCTG
GGCCGGCTGG AGAATGTGCG CGTGGGCGAC GTGGTGCTCG CCATCGGCAA CCCGTTTGGC
GTGGGCCAGA CGGTGACGAT GGGCATTGTC TCCGCACTGG GACGCAGCCA CTTGGGCATC
AACACCTTCG AGAACTTCAT CCAGACCGAC GCCGCGATCA ACCCAGGCAA TTCGGGTGGC
GCCCTCGTTG ATGCCGACGG CAACCTCCTC GGGATCAACA CCGCGATCTA CTCGCGCTCG
GGCGGCTCGC TGGGCATCGG CTTCGCGATT CCGGTATCGC TGGCTAAGCA GGTGATGGAG
TCGATTATCT CGACCGGTAG CGTGGTCCGC GGCTGGATCG GTGTTGAACC GCAAGATGTG
ACGCCGGAAA TTGCCGAGTC GTTTGGCCTG TCGCGCAAAG ATGGCGCGCT GATTGCCGCC
GTGGTCCAAG GTGGGCCGGC GGACAGGGCG GGCCTGCGCC CGGGGGACAT TCTCACGAGC
GTGAATGGTC AGCCGATCCT GGATACGACG GCGCTGCTGA ACAGCATCGC GCAGCTGAAA
CCCGGTGCGG AAGCCAAGGT GACGGTGTCG CGCAAGGGCA AGGCGGTAGA ACTGACCATC
GTTGTCGGCA AACGTCCGCC GCCAACGCGC CGCAACGTAC CGATGCCCTC GCAGGACGAC
GAAGAACAGC AGTAA
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| Protein sequence | MLRRFWLFFA QAVTVVLAVW FVIATLKPDW LQRGRVAVQS GSPIVALKEV APIGHGGTSS
NSYAEAAKVA MPAVVNIFSS KNAPKRGTNP QASADPWFRF FFGDRAPEQR QEPTASLGSG
VIVSSEGYIL TNHHVVDGAD EIEVALTDGR KANAKVVGSD PETDLAVLKI NLPNLPAITL
GRLENVRVGD VVLAIGNPFG VGQTVTMGIV SALGRSHLGI NTFENFIQTD AAINPGNSGG
ALVDADGNLL GINTAIYSRS GGSLGIGFAI PVSLAKQVME SIISTGSVVR GWIGVEPQDV
TPEIAESFGL SRKDGALIAA VVQGGPADRA GLRPGDILTS VNGQPILDTT ALLNSIAQLK
PGAEAKVTVS RKGKAVELTI VVGKRPPPTR RNVPMPSQDD EEQQ
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