Gene Rpic12D_2861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2861 
Symbol 
ID8020533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3017508 
End bp3018254 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID644831648 
Productprotein of unknown function DUF34 
Protein accessionYP_002982803 
Protein GI241664443 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.227664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGAA AAGAACTTGA ATTGTACTTG AACGACCTGT TGCAGGCGGC CCGTTTTCGG 
GACTACTGCC CCAATGGTCT GCAGGTGCAA GGGCGCGAAA GCGTTGCCCA TATCGTGACG
GGCGTGACGG CCAGCCTGGC CTTGATCGAG GCTGCCGTCG CAGCCCGTGC GGACGCCATC
CTTGTGCATC ATGGTTACTT CTGGAAGGGC GAGGATGGCC GTGTCGTAGG CCAGAAGCAT
GCGCGCTTGA AGCAACTTCT GACGCACGAT CTCAACCTGT TCGCATATCA CTTGCCGCTC
GATGCGCACC CTGACCTGGG CAACAACGCG CAGCTAGGGG CCTTGCTGGG CATCTCGCCC
CAAGGCCGGT TCGGCGACGA TGAACTGGGT TGGATTGGCG CGCTCGCCGC ACCTACCACG
CTGCGTGCCT TTGCGCAGAC GGTGTCGGCA AGGCTCAACC GGGTGCCGCT CGTGATCGGT
GAGGAGGATT GTCCGGTGCG TACAGTCGGC TGGTGCACAG GCGGGGCGCA AGGCTGGTTT
GATGCTGCGG TGGCCGCCGG TGTAGACGTG TATCTGAGCG GTGAAGCGTC GGAGCAGACC
ACGCATCTTG CGCGTGAATC GGGTGTTGCC TATATCGGTG CGGGTCACCA CGCCACCGAG
CGCGGTGGCG TTCGGGCGCT CGGCACTCAT CTGGCCGAGC GCTTCGGTGT GCGTCACACC
TTCATCGATA TCCCGAATCC GGTGTGA
 
Protein sequence
MDRKELELYL NDLLQAARFR DYCPNGLQVQ GRESVAHIVT GVTASLALIE AAVAARADAI 
LVHHGYFWKG EDGRVVGQKH ARLKQLLTHD LNLFAYHLPL DAHPDLGNNA QLGALLGISP
QGRFGDDELG WIGALAAPTT LRAFAQTVSA RLNRVPLVIG EEDCPVRTVG WCTGGAQGWF
DAAVAAGVDV YLSGEASEQT THLARESGVA YIGAGHHATE RGGVRALGTH LAERFGVRHT
FIDIPNPV