Gene Rpic12D_2860 details

Gene Information

• Locus tag: Rpic12D_2860
• Symbol: mscL
• ID: 8020532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12D
• Kingdom: Bacteria
• Replicon accession: NC_012856
• Strand: +
• Start bp: 3017067
• End bp: 3017495
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644831647
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_002982802
• Protein GI: 241664442
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.219386
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACTGA TGCAAGACTT CAAGAAATTC GCGATGCGCG GCAACGTGAT CGACCTGGCA 
GTGGGTGTGA TCATCGGTGC GGCGTTCAGC AAAATCGTGG ATTCGCTCGT CAATGATCTG 
ATCATGCCGC TGATCAGCCG CATCGTCGGC AAGCTGGATT TCTCGAGCCT GTTCATCCAA 
CTCGCAGAGG CGCCCGCTGG TGTGCCGCAT ACCCTGGCGG ATCTGAAGAA GGCAGGCGTG 
CCGGTCTTCG CCTACGGCAA TTTCATCACC GTGGCGGTCA ATTTTCTGAT TCTCGCGTTT 
ATCGTATTTC TGATGGTGCG CGCCATCACG CGCATGATCG ACGCCAACCC ACCGGCAGCG 
CCCGCCGAAA CACCCGAAGA CATTCAACTG CTGCGCGAGA TTCGCGACAG CCTGAAGAAC 
AAACCGTAA 

 

Protein sequence

MALMQDFKKF AMRGNVIDLA VGVIIGAAFS KIVDSLVNDL IMPLISRIVG KLDFSSLFIQ 
LAEAPAGVPH TLADLKKAGV PVFAYGNFIT VAVNFLILAF IVFLMVRAIT RMIDANPPAA 
PAETPEDIQL LREIRDSLKN KP