Gene Rpic12D_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2859 
Symbol 
ID8020531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3016213 
End bp3016821 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content62% 
IMG OID644831646 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_002982801 
Protein GI241664441 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.563831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.225485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC AGCAAAACGT GGACAAGGGT CGCCGCAATC TATTGATTGC GACGTCCGTG 
GCTGGTGGTG TGGGAGGGGT TGCAGTTGCG GCCCCTTTCG TTTGCACATT CGCACCATCT
GAAAAAGCCC GCGCAGCGGG CGCGCCCGTA GAGGCGGACG TGAGCGACCT GGCCCCGGGC
CAGATGAAGG TGGTGGAATG GCGCGGCAAG CCCGTCTGGC TGCTCAAACG CACGCCCGAC
ATGCTGGAGT CGCTCAAGAA GACCGATAAC GAAGTTGCAG ACCCCAAGTC CGACGTGCCC
TTCACCATGA AGACGCCGGA CTATTGCAAG AACGAAACCC GCTCCCGTGC CGAGCACAAG
GACCTGCTGG TCGTGGTCGG CATCTGCTCC CATCTCGGCT GCTCCCCATC TGGTCCGTTT
CCCGCAGGTG CCAACGTGCA GCTCGCTGGA GACCCCGGCT TCGTCTGCCC GTGCCATGGC
TCCACGTTCG ACCTGGCTGG TCGCGTGTTC AAGAACAAGC CCGCGCCCCA GAACCTCGAC
GTTCCGCCGT ACATGTTCCT GTCCGACACG AAGCTGGTGA TCGGTAAAGA CGAGAAAGGA
GAGGCTTGA
 
Protein sequence
MSDQQNVDKG RRNLLIATSV AGGVGGVAVA APFVCTFAPS EKARAAGAPV EADVSDLAPG 
QMKVVEWRGK PVWLLKRTPD MLESLKKTDN EVADPKSDVP FTMKTPDYCK NETRSRAEHK
DLLVVVGICS HLGCSPSGPF PAGANVQLAG DPGFVCPCHG STFDLAGRVF KNKPAPQNLD
VPPYMFLSDT KLVIGKDEKG EA