Gene Rpic12D_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2812 
Symbol 
ID8020483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2980512 
End bp2981153 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID644831599 
Productcytochrome o ubiquinol oxidase, subunit III 
Protein accessionYP_002982755 
Protein GI241664395 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA ATGTTCTAGA CGGTCACGCC GCGCACGGTC ACGCGCACGG CCACGACCAC 
GCGCATGACC ATGCGCACCA CCACGATGCC GCAGACACCA AGGTCTTCGG CTTCTGGGTG
TACCTGATGA GCGACTTGAT CATCTTCGCG TCGCTGTTCG CCACGTTCTG CGTCCTGCGC
GGTGCGACGG CCGGCGGCCC GACTGGCAAG GAACTCTTCG ATCTGTCGTA CGTGGCGATC
GAAACCGGCA TCCTGCTGGT GTCGTCCATC ACCTACGGCA TGGTGATGAT CAGCCTGCAG
AACGGCCGCA AGGATCAAGT GATGCTGTGG CTGGGCATCA CCCTGCTGCT GGGTGCAGCG
TTTGTCGGCA TGGAAATCAA CGAGTTCCAC CATCTGATCG CAGAAGGCGC CGGCCCGAGC
CGCAGCGCAT TCCTGTCGTC GTTCTTCCTG CTGGTCGGCA CGCACGGCCT GCACGTGGCG
AGCGGCATGC TGTGGATCAT CGTCCTGATG TGGCAGATCG GTGCCAAAGG CCTGACTCCG
ACCCAATCGA CTCGACTGTC GTGCCTGAGC CTGTTCTGGC ACTTCTTGGA CGTGGTGTGG
ATCGGTGTGT TTACCGTCGT CTATCTGCTG GGAGCGATGT AA
 
Protein sequence
MASNVLDGHA AHGHAHGHDH AHDHAHHHDA ADTKVFGFWV YLMSDLIIFA SLFATFCVLR 
GATAGGPTGK ELFDLSYVAI ETGILLVSSI TYGMVMISLQ NGRKDQVMLW LGITLLLGAA
FVGMEINEFH HLIAEGAGPS RSAFLSSFFL LVGTHGLHVA SGMLWIIVLM WQIGAKGLTP
TQSTRLSCLS LFWHFLDVVW IGVFTVVYLL GAM