Gene Rpic12D_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2808 
Symbol 
ID8020479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2977609 
End bp2978097 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID644831595 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_002982751 
Protein GI241664391 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCT CCAGCACCCT CGACGGCTGC CTGCGCAGCA AGGGCTGCCT GTACGAGGTG 
ATTCGCCATC CGCATACCCA TACCAGCACG GAGACCGCGC AGTCTGCACA TGTCCCGGGC
GACCGTCTGG CCAAGACGCT GCTGCTCGAA GACAAGCTCG GCTATGTCGC GGCCGTGTTG
CCATCGACGT ATCACCTGCA TCTGTCGGAA TTGCAAAAGG AAACTGGCCG CCTGGACCTG
ACACTGGCGG ATGAATCCGA GTTGCGCGAA GTCTTTCGGG ACTGCGATGC CGGCGCCGTA
CCACCCGTTG GCATGGCTTA CGGCATGCCC ACCTACATCG ACAGCAGTCT GATGGCCCAC
GGCGACGTCT ACTTCGAAGC CGGCGACCAC GAAAATGTCG TGCATATGGA CATGGATCAG
TTCATGGCTT TAATGCGCGA CGCCAAGCCC GGACACTTCG CGTATCGCAT GCAGGGCATG
CTCTTCTGA
 
Protein sequence
MSISSTLDGC LRSKGCLYEV IRHPHTHTST ETAQSAHVPG DRLAKTLLLE DKLGYVAAVL 
PSTYHLHLSE LQKETGRLDL TLADESELRE VFRDCDAGAV PPVGMAYGMP TYIDSSLMAH
GDVYFEAGDH ENVVHMDMDQ FMALMRDAKP GHFAYRMQGM LF