| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2806 |
|---|
| Symbol | |
|---|
| ID | 8020477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2974347 |
|---|
| End bp | 2976929 |
|---|
| Gene Length | 2583 bp |
|---|
| Protein Length | 860 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644831593 |
|---|
| Product | glucosyltransferase MdoH |
|---|
| Protein accession | YP_002982749 |
|---|
| Protein GI | 241664389 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2943] Membrane glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCTAC CTGTTACCTC CGGGCTGAAC GTGACGACAG CCCAGACTGT CGGTGCTGCC
GGCACCGCCC CCTCCACCAG CCCTGCCACA GCGCAGTCTG TGGCCGACCA TTACCTTGAT
GCGCTGCCGC TGGGGCCCGA TGCGCGTGCT GCGCTGCTGC GCAATGCGGG CATCACGGCC
GGCGACGACG ATGCAGCAGC GCTTGCCAAG CTGCATCGTG CGCTCGCCCG GCTTGACCCG
GCGCAAACGA CCTCGCTCGA CGCCGACGCA CCGGCCTACG CCTCCGTAGG CTCGCGTCTG
GATGCCGCCT ATGGCGCCAC GCGCGCCGAT GCCGCATCGA CCGAGCCCTC CGCCCAACCT
GCTCCACCCG TTGAGCACGA CAGCCAGGGC CGCATCCACC TGGATACCGG CCCCACCCCT
GCGCGCCGTT CGATGGTGCC GTGGCCGTGG GTGCTCGGGC CGATCTGGCG CGCGCGCAAG
GCCGTCGACC GCTGGATGCA TGGCGGCAAG AAGCCGGTTC CGTACGAAGC GCCTGACTCG
CCGGACCCGA AAGGCATCTG GCGCTTCGTC GGCGCGCGTC GCCGCCTGAC GCTGCTCGCA
CTGATGATCG CGCAGACCGT GGCTGCCACC TGGGCGATGA GCACGGTGCT GCCGTACCAC
GGCGCCGACT GGCTCGAAGC CATCATCATC GTGCTGTTTG CGGTGCTGTT TTGCTGGGTG
TCGGCGGGCT TCTGGACGGC CATCACCGGC TTCCTGCTGC TGGCCTTCCA CGGCGACCGC
TTCGTCATCT CGCGCCGCGC CACGCCCGAC GCCACCATTC CCGACGACGC ACGCACGGCC
ATCGTCATGC CGATCTGCAA TGAAGATGTG CAGCGCGTCT TCGCGGGGCT GCGCGCGACG
TACGAATCGT TGCAGCGCAC GGGGCATCTG GAGCACTTCG ACTTTTTCGT ACTGTCGGAC
TCCGGCGACC CGGACATCCG CACGGCAGAA GCCGATGCCT GGCTGCACAT CTGCCGCGCA
CTCGATGGTT TCGGTCGTAT CTTCTACCGT TGGCGCCGCC ACCGCGTGAA GCGCAAGAGC
GGCAACATCG ACGATTTCTG CCGGCGCTGG GGCGGCCGGT ACCGCTACAT GATCGTGCTC
GACGCAGACA GCGTGATGAG CGGCGATTGC CTGACGCGCC TGGTGCAGTT GATGGAAGGC
GCGCCCAGCG CGGGCATTAT CCAGACCGCC CCGCGCGCGG CCGGCCGCGA CACGCTGTAT
GCGCGTATCC AGCAGTTCGC CACGCGTGTG TACGGGCCGC TGTTCACCGC CGGCCTGCAC
TACTGGCAAC TCGGCGAATC GCACTACTGG GGCCACAACG CCATCATCCG GCTGGACCCG
TTCATCAAGC ACTGTGCGCT GGCGCCCATT CCTGGCAAGG GCTCGCTTTC CGGCGAGATC
ATGTCGCACG ACTTTGTCGA AGCCGCACTC ATGCGCCGGG CCGGCTGGGC CGTGTGGATC
GCCTACGACC TCGACGGCAG CTACGAAGAA ATGCCGCCCA ATCTGCTCGA CGAGCTGGGC
CGCGACCGCC GCTGGTGCCA CGGCAACCTG ATGAACTTCC GCCTGTTCGG CGCACCGGGC
TTCCACCGTG TGCACCGCGC GGTGTTCATC ACCGGCGTCA TGGCCTATCT GTCCGCGCCG
CTGTGGTTCC TGTTCCTGAT CCTGTCGACG GCCCTGTTGG CCAAGCACAC GCTGATCGCG
CCCGAATACT TCACGCAGCC GCGCCAGCTC TTCCCGATCT GGCCGGAGTG GCATCCGGAA
AAAGCCGCCG CGCTGTTTTC TGCCACCGCC ACCGTGCTGT TCCTGCCGAA GATCCTGAGC
GTGCTTGTAC TGTGGGCGCA GGGGCCGAAA CGCTTTGGCG GGGCGATCCA CCTGGCGTTG
TCGATGGCGA TCGAGGCGGC ATTCTCGGTG CTGGCGGCGC CGGTGCGCAT GCTGTTCCAC
ACGCGCTTTG TGACCGCCGC GTTCCTCGGC TGGAAGGTGC ATTGGAAATC GCCCCCGCGC
GAAGACGCAC AGACGCATTG GGGCGACGCC GTGCGCCGCC ACGGTCTGCA CACCGTCATC
GGCATCGTCT GGGCTGCAAT CGTGTATTGG CTGAACCCGA GCTTCCTGTG GTGGCTGTCG
CCGGTCGTGG GTGCGCTCAT CGTGTCGATC CCGCTGTCGG TGTTCTCCAG CCGCGTGAGC
CTGGGACGCC GCATGCGGCG GCTGCGCCTG TTCATGATCC CCGAGGAAGT GCGCCCGCCG
CGTGAGTTGC GCGCCACGCG CAAGCACCTG CGCAATGCGC CGCCGATGCC GGATTTCCGC
CAAGCCGTGG TCGACCCCGT CACCAACGCG CTGATGTGCG CGATCGGCAC GGCGCGCTTT
CCAAGGGACC GGCGCCTGAT TGCCGTGCGT GAGGCGCATG TGCGCCATGC GTTGGAGGTT
GGCCCGGACA AGCTCACGGG CAAGCAGAAG CTGGTGTTGC TGTCGGATCC ATTTTCCCTG
TCGGCGCTGC ACCTGGCGGT GTGGTCGTCA TCTGCACAGC GTGCGGCCTG GGAAGCTGCA
TAG
|
|---|
| Protein sequence | MELPVTSGLN VTTAQTVGAA GTAPSTSPAT AQSVADHYLD ALPLGPDARA ALLRNAGITA
GDDDAAALAK LHRALARLDP AQTTSLDADA PAYASVGSRL DAAYGATRAD AASTEPSAQP
APPVEHDSQG RIHLDTGPTP ARRSMVPWPW VLGPIWRARK AVDRWMHGGK KPVPYEAPDS
PDPKGIWRFV GARRRLTLLA LMIAQTVAAT WAMSTVLPYH GADWLEAIII VLFAVLFCWV
SAGFWTAITG FLLLAFHGDR FVISRRATPD ATIPDDARTA IVMPICNEDV QRVFAGLRAT
YESLQRTGHL EHFDFFVLSD SGDPDIRTAE ADAWLHICRA LDGFGRIFYR WRRHRVKRKS
GNIDDFCRRW GGRYRYMIVL DADSVMSGDC LTRLVQLMEG APSAGIIQTA PRAAGRDTLY
ARIQQFATRV YGPLFTAGLH YWQLGESHYW GHNAIIRLDP FIKHCALAPI PGKGSLSGEI
MSHDFVEAAL MRRAGWAVWI AYDLDGSYEE MPPNLLDELG RDRRWCHGNL MNFRLFGAPG
FHRVHRAVFI TGVMAYLSAP LWFLFLILST ALLAKHTLIA PEYFTQPRQL FPIWPEWHPE
KAAALFSATA TVLFLPKILS VLVLWAQGPK RFGGAIHLAL SMAIEAAFSV LAAPVRMLFH
TRFVTAAFLG WKVHWKSPPR EDAQTHWGDA VRRHGLHTVI GIVWAAIVYW LNPSFLWWLS
PVVGALIVSI PLSVFSSRVS LGRRMRRLRL FMIPEEVRPP RELRATRKHL RNAPPMPDFR
QAVVDPVTNA LMCAIGTARF PRDRRLIAVR EAHVRHALEV GPDKLTGKQK LVLLSDPFSL
SALHLAVWSS SAQRAAWEAA
|
|---|
| |