Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2798 |
Symbol | prfA |
ID | 8020469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2967766 |
End bp | 2968848 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831585 |
Product | peptide chain release factor 1 |
Protein accession | YP_002982741 |
Protein GI | 241664381 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCCA GCATGCTGTC CAAGCTCGAC CAACTGGCCG AGCGCATCGT CGAAATCAAC GCGCTGCTTG CGCGTGAAGA CGCCACCGCC AACCTCGACC AATACCGCAA GCTCACGCGC GAACATGCCG AGCTGGAGCC GGTGGTCGCG CAATTTGCCG CTTGGAAGCG GGCCGAGGAA GACATCGCCA CAGCGCAGGA GTTGGCGGCC GATCCTGACA TGAAGGCGTT TGGCGAAGAC GAACTGCGCG CCGCGCGTGA GCGCATGGAG TCTCTCGAAG GCGAGCTGCA ACGCCTGCTG CTTCCGAAAA ACCCGAACGA CCATCGCAAC ATCTTCGTGG AAATCCGTGC CGGTACTGGC GGCGATGAGT CCGCGCTCTT TGCCGGCGAC CTGCTGCGGA TGTACACACG CTACGCCGAA CGGCAGCGCT GGCAGGTGGA GATCGTCAGC GAATCGGCGT CGGACCTGGG CGGCTACAAG GAAGTGATCG CGCGGCTGGT GGGCGAAGGT GCGTACTCGC GCCTGAAGTT TGAATCGGGC GGCCACCGTG TGCAGCGCGT GCCAGCCACG GAGGCACAGG GGCGCATCCA CACCTCAGCC TGCACCGTGG CGATCATGCC CGAGGCCGAT GCGCTGGCCG ACATCCAGAT CAACCCGGCG GATTTGCGCA TTGACACGTT CCGCGCGTCC GGCGCGGGTG GCCAGCACAT CAACAAGACG GATTCGGCCG TGCGCATCAC CCACCTGCCG ACCGGCCTGG TGGTGGAGTG CCAGGACGAC CGCAGCCAGC ACCGCAACAA GGACCGCGCC ATGCAAGTCC TCGCCGCCCG CCTGAAGGAT CGCCAGGAGC GCGAGGCGCA AGCCAAGGAA GCCAGCGCAC GCAAGAGCCT GATCGGCTCG GGCGACCGCT CCGACCGCAT CCGCACGTAC AACTTCCCGC AGGGGCGCGT GACGGATCAC CGCATCAACC TGACGCTGTA CAAGATCGAC GCGATCATGG ATGGCGACCT CGACGAACTC GTCGGCGCAT TGGCGGCCGA GCATCAGGCC GAGCAGCTTG CGGCGCTGGG TGACGACGCC TGA
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Protein sequence | MKPSMLSKLD QLAERIVEIN ALLAREDATA NLDQYRKLTR EHAELEPVVA QFAAWKRAEE DIATAQELAA DPDMKAFGED ELRAARERME SLEGELQRLL LPKNPNDHRN IFVEIRAGTG GDESALFAGD LLRMYTRYAE RQRWQVEIVS ESASDLGGYK EVIARLVGEG AYSRLKFESG GHRVQRVPAT EAQGRIHTSA CTVAIMPEAD ALADIQINPA DLRIDTFRAS GAGGQHINKT DSAVRITHLP TGLVVECQDD RSQHRNKDRA MQVLAARLKD RQEREAQAKE ASARKSLIGS GDRSDRIRTY NFPQGRVTDH RINLTLYKID AIMDGDLDEL VGALAAEHQA EQLAALGDDA
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