Gene Rpic12D_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2798 
SymbolprfA 
ID8020469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2967766 
End bp2968848 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content66% 
IMG OID644831585 
Productpeptide chain release factor 1 
Protein accessionYP_002982741 
Protein GI241664381 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCA GCATGCTGTC CAAGCTCGAC CAACTGGCCG AGCGCATCGT CGAAATCAAC 
GCGCTGCTTG CGCGTGAAGA CGCCACCGCC AACCTCGACC AATACCGCAA GCTCACGCGC
GAACATGCCG AGCTGGAGCC GGTGGTCGCG CAATTTGCCG CTTGGAAGCG GGCCGAGGAA
GACATCGCCA CAGCGCAGGA GTTGGCGGCC GATCCTGACA TGAAGGCGTT TGGCGAAGAC
GAACTGCGCG CCGCGCGTGA GCGCATGGAG TCTCTCGAAG GCGAGCTGCA ACGCCTGCTG
CTTCCGAAAA ACCCGAACGA CCATCGCAAC ATCTTCGTGG AAATCCGTGC CGGTACTGGC
GGCGATGAGT CCGCGCTCTT TGCCGGCGAC CTGCTGCGGA TGTACACACG CTACGCCGAA
CGGCAGCGCT GGCAGGTGGA GATCGTCAGC GAATCGGCGT CGGACCTGGG CGGCTACAAG
GAAGTGATCG CGCGGCTGGT GGGCGAAGGT GCGTACTCGC GCCTGAAGTT TGAATCGGGC
GGCCACCGTG TGCAGCGCGT GCCAGCCACG GAGGCACAGG GGCGCATCCA CACCTCAGCC
TGCACCGTGG CGATCATGCC CGAGGCCGAT GCGCTGGCCG ACATCCAGAT CAACCCGGCG
GATTTGCGCA TTGACACGTT CCGCGCGTCC GGCGCGGGTG GCCAGCACAT CAACAAGACG
GATTCGGCCG TGCGCATCAC CCACCTGCCG ACCGGCCTGG TGGTGGAGTG CCAGGACGAC
CGCAGCCAGC ACCGCAACAA GGACCGCGCC ATGCAAGTCC TCGCCGCCCG CCTGAAGGAT
CGCCAGGAGC GCGAGGCGCA AGCCAAGGAA GCCAGCGCAC GCAAGAGCCT GATCGGCTCG
GGCGACCGCT CCGACCGCAT CCGCACGTAC AACTTCCCGC AGGGGCGCGT GACGGATCAC
CGCATCAACC TGACGCTGTA CAAGATCGAC GCGATCATGG ATGGCGACCT CGACGAACTC
GTCGGCGCAT TGGCGGCCGA GCATCAGGCC GAGCAGCTTG CGGCGCTGGG TGACGACGCC
TGA
 
Protein sequence
MKPSMLSKLD QLAERIVEIN ALLAREDATA NLDQYRKLTR EHAELEPVVA QFAAWKRAEE 
DIATAQELAA DPDMKAFGED ELRAARERME SLEGELQRLL LPKNPNDHRN IFVEIRAGTG
GDESALFAGD LLRMYTRYAE RQRWQVEIVS ESASDLGGYK EVIARLVGEG AYSRLKFESG
GHRVQRVPAT EAQGRIHTSA CTVAIMPEAD ALADIQINPA DLRIDTFRAS GAGGQHINKT
DSAVRITHLP TGLVVECQDD RSQHRNKDRA MQVLAARLKD RQEREAQAKE ASARKSLIGS
GDRSDRIRTY NFPQGRVTDH RINLTLYKID AIMDGDLDEL VGALAAEHQA EQLAALGDDA